Job Description P76341 Confidence 85.51% Date Thu Jan 5 12:21:58 GMT 2012 Rank 29 Aligned Residues 62 % Identity 19% Template d1nkga1 SCOP info Prealbumin-like Starch-binding domain-like Rhamnogalacturonase B, RhgB, middle domain Resolution 1.50

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		21	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	N	A	A	Q	Q	N	I	L	S	V	H	I	L	N	Q	Q	T	G	K	P	A	A	D	V	T	V	T	L	E	K	K	A	D	N	G	W	L	Q	L	N	T	A	K	T	D	K	D	G	R	I	K	A	L	W	P	E	Q	T	A	T	T	G	D	Y	R	V	V	F	K	T	G	D	Y
Query Conservation
Alig confidence																								.	.	.													.	.	.	.	.											.	.	.	.
Template Conservation																								.	.	.													.	.	.	.	.											.	.	.	.
Template Sequence		V	A	A	S	G	R	G	K	V	A	G	T	A	S	G	A	D	S	S	M	D	W	.	.	.	V	V	H	W	Y	N	D	A	A	Q	Y	W	.	.	.	.	.	T	Y	T	S	S	S	G	S	F	T	.	.	.	.	S	P	A	M	K	P	G	T	Y	T	M	V	Y	Y	Q	G	E	Y
Template Known Secondary structure				G	G	G		B								S	S		T	T	S			.	.	.							S	S					.	.	.	.	.					T	T					.	.	.	.				B		S										T	T
Template Predicted Secondary structure																								.	.	.													.	.	.	.	.											.	.	.	.
Template SS confidence
		252	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.				.	.	.	.	.	.	280	.	.	.	.	.						.	.	.	.	290	.	.	.	.	.					.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions