Job Description P76341 Confidence 100.00% Date Thu Jan 5 12:21:58 GMT 2012 Rank 5 Aligned Residues 109 % Identity 36% Template d1kgia_ SCOP info Prealbumin-like Transthyretin (synonym: prealbumin) Transthyretin (synonym: prealbumin) Resolution 1.80

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		25	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.		.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.
Predicted Secondary structure																															.
Query SS confidence																															.
Query Sequence		Q	Q	N	I	L	S	V	H	I	L	N	Q	Q	T	G	K	P	A	A	D	V	T	V	T	L	E	K	K	A	.	D	N	G	W	L	Q	L	N	T	A	K	T	D	K	D	G	R	I	K	A	L	W	P	E	Q	T	A	T	T	G	D	Y	R	V	V	F	K	T	G	D	Y	F	K	K	Q	N	L	E	S	F
Query Conservation																															.
Alig confidence																															.
Template Conservation
Template Sequence		S	K	C	P	L	M	V	K	V	L	D	A	V	R	G	S	P	A	V	D	V	A	V	K	V	F	K	K	T	A	D	G	S	W	E	P	F	A	S	G	K	T	A	E	S	G	E	L	H	G	L	T	T	D	E	K	F	T	E	G	V	Y	R	V	E	L	D	T	K	S	Y	W	K	A	L	G	I	S	P	F
Template Known Secondary structure					S								T	T	T	T				T	T										T	T	S												T	T	S					S			T	T	T	S		S																T	T				S
Template Predicted Secondary structure
Template SS confidence
		8	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.
		104	.	.	.	.	.	110	.	.	.	.	.	.		.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.
Predicted Secondary structure															.
Query SS confidence															.
Query Sequence		F	P	E	I	P	V	E	F	H	I	N	K	V	.	N	E	H	Y	H	V	P	L	L	L	S	Q	Y	G	Y	S	T
Query Conservation															.
Alig confidence															.
Template Conservation
Template Sequence		H	E	Y	A	E	V	V	F	T	A	N	D	S	G	H	R	H	Y	T	I	A	A	L	L	S	P	Y	S	Y	S	T
Template Known Secondary structure			S									S	T	T	S												T	T
Template Predicted Secondary structure
Template SS confidence
		88	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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