Return to main results Retrieve Phyre Job Id

Job DescriptionP76341
Confidence92.19%DateThu Jan 5 12:21:58 GMT 2012
Rank16Aligned Residues51
% Identity22%Templatec2pz4A_
PDB info PDB header:cell adhesionChain: A: PDB Molecule:protein gbs052; PDBTitle: crystal structure of spab (gbs52), the minor pilin in gram-positive2 pathogen streptococcus agalactiae
Resolution1.80 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   34.....40.........50...... ...60.........70.........80........
Predicted Secondary structure 











...................

















Query SS confidence 






















. . . . . . . . . . . . . . . . . . .































Query Sequence  LNQQTGKPAADVTVTLEKKADNG. . . . . . . . . . . . . . . . . . . WLQLNTAKTDKDGRIKALWPEQTATTGDYRVV
Query Conservation 


  
 




 
 
       ...................   
    

 



  
        
 
 
 
Alig confidence 






















...................
















....










Template Conservation       
 



  
 

                 
          
   


  
    ....  
  
 
   
Template Sequence  IAPKEGTPIEGVLYQLYQLKSTEDGDLLAHWNSLTITELKKQAQQVFEATTNQQGKATF. . . . NQLPDGIYYGL
Template Known Secondary structure  S

SS

SS
S



TTTS


TTS....S
Template Predicted Secondary structure 



























....






Template SS confidence 









































































   22.......30.........40.........50.........60.........70.........80 .........90.
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions