Job Description P76341 Confidence 5.65% Date Thu Jan 5 12:21:58 GMT 2012 Rank 91 Aligned Residues 63 % Identity 17% Template c1kv3F_ PDB info PDB header:transferase Chain: F: PDB Molecule:protein-glutamine gamma-glutamyltransferase; PDBTitle: human tissue transglutaminase in gdp bound form Resolution 2.80 Å

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		40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.			.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.
Predicted Secondary structure																																					.	.
Query SS confidence																																					.	.
Query Sequence		K	P	A	A	D	V	T	V	T	L	E	K	K	A	D	N	G	W	L	Q	L	N	T	A	K	T	D	K	D	G	R	I	K	A	L	.	.	W	P	E	Q	T	A	T	T	G	D	Y	R	V	V	F	K	T	G	D	Y	F	K	K	Q	N	L	E	S	F	F	P	E	I	P	V	E	F	H	I	N	K	V	N
Query Conservation																																					.	.
Alig confidence																																					.	.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		S	Q	E	A	G	T	K	A	R	F	P	L	R	D	A	V	E	E	G	D	W	T	A	T	V	V	D	Q	Q	D	C	T	L	S	L	Q	L	T	T	P	A	N	A	P	I	G	L	Y	R	L	S	L	E	A	S	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure			S	T	T	S	S								S	S				S	S										T	T										T	T															.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		68	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.
		118	.	120	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	H	Y	H	V	P	L	L	L	S	Q	Y
Query Conservation
Alig confidence		.	.	.
Template Conservation		.	.	.
Template Sequence		.	.	.	H	F	I	L	L	F	N	A	W
Template Known Secondary structure		.	.	.								T	T
Template Predicted Secondary structure		.	.	.
Template SS confidence
					134	.	.	.	.	.	140	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions