Return to main results Retrieve Phyre Job Id

Job DescriptionQ47270
Confidence0.88%DateThu Jan 5 12:36:42 GMT 2012
Rank99Aligned Residues11
% Identity36%Templated1qhda1
SCOP infoA virus capsid protein alpha-helical domain A virus capsid protein alpha-helical domain vp6, the major capsid protein of group A rotavirus
Resolution1.95

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   5....10.....
Predicted Secondary structure 


Query SS confidence 










Query Sequence  LIRVMNGHIYR
Query Conservation    

    
 
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Template Conservation   
 
 


 
 
Template Sequence  MIITMNGNEFQ
Template Known Secondary structure  TT
Template Predicted Secondary structure 



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   37..40.......
 
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No model constructed - rank, confidence too low




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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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