Job Description Q47270 Confidence 1.77% Date Thu Jan 5 12:36:42 GMT 2012 Rank 28 Aligned Residues 35 % Identity 20% Template d1a6ca1 SCOP info Nucleoplasmin-like/VP (viral coat and capsid proteins) Positive stranded ssRNA viruses Comoviridae-like VP Resolution 3.50

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		14	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	R	V	P	N	R	R	K	R	K	P	E	L	K	P	S	E	I	P	T	L	L	G	Y	T	A	S	L	V	D	K	K	W	L	R
Query Conservation
Alig confidence
Template Conservation
Template Sequence		F	K	V	P	K	D	A	K	K	G	K	H	L	G	T	F	D	I	R	Q	A	I	M	D	Y	G	G	L	H	S	Q	E	W	C	A
Template Known Secondary structure						T	T			T	T															S
Template Predicted Secondary structure
Template SS confidence
		16	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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