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Job DescriptionP0AAE8
Confidence100.00%DateThu Jan 5 11:12:43 GMT 2012
Rank1Aligned Residues428
% Identity17%Templatec3giaA_
PDB info PDB header:transport proteinChain: A: PDB Molecule:uncharacterized protein mj0609; PDBTitle: crystal structure of apct transporter
Resolution2.32 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
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Query Sequence  SAKKIGLFACTGVVAGNMMGSGIALLPANLASIGG. IAIWGWIISIIGAMSLAYVYARLATKNPQQGGPIAYAGE. ISPA
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Template Sequence  KNKKLSLWEAVSMAVGVMIGASIFSIFGVGAKIAGRNLPETFILSGIYALLVAYSYTKLGAKIVSNAGPIAFIHKAIGDN
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B
TTTSGGGTT


TTT
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   4.....10.........20.........30.........40.........50.........60.........70.........80...
 
   81........90.........100.........110.........120.........130.........140.........150.........
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Query Sequence  . FGFQTGVLYYHANWIGNLAIGITAVSYLSTFFPVLNDPVPAGIACIAIVWVFTFVNMLGGTWVSRLTTIGLVLVLIPVV
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Template Sequence  IITGALSILLWMSYVISIALFAKGFAGYFLPLINAPINTFNIAITEIGIVAFFTALNFFGSKAVGRAEFFIVLVKLLILG
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   84.....90.........100.........110.........120.........130.........140.........150.........160...
 
   160.........170.........180.........190.........200.........210.........220.........230.........
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Query Sequence  MTAIVGWHWFDAATYAANWNTADTTDGHAIIKSILLCLWAFVGVESAAVSTGMVKNPKRTVPLATMLGTGLAGIVYIAAT
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Template Sequence  LFIFAGLITIHPSY. . . VIPDLAPSAVSGMIFASAIFFLSYMGFGVITNASEHIENPKKNVPRAIFISILIVMFVYVGVA
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GGG...TS


SGGGGGTTTGGGBSS
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   164.....170....... ..180.........190.........200.........210.........220.........230.........240
 
   240.........250...... ...260.........270.........280.........290.........300.........310........
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Query Sequence  QVLSGMYPSSVMAASGA. PFAISASTILGNWAAPLVSAFTAFACLTSLGSWMMLVGQAGVRAANDGNFPKVYGEVDSNGI
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Template Sequence  ISAIGNLPIDELIKASENALAVAAKPFLGNLGFLLISIGALFSISSAMNATIYGGANVAYSLAKDGELPEFFERKVWFKS
Template Known Secondary structure  TTS
TGGGTTTSS

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   241........250.........260.........270.........280.........290.........300.........310.........320
 
   319320.........330.........340.........350.........360.........370.........380.........390........
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Query Sequence  PKKGLLLAAVKMTALMILITLMNSAGGKASDLFGELTGIAVLLTMLPYFYSCVDLIRFEGVNIRNFVSLICSVLGCVFCF
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Template Sequence  TEGLYITSALGVLFALL. . . . . . FNMEGVASITSAVFMVIYLFVILSHYILIDEVGGRKEIVIFSFIVVLGVFLLLLYYQ
Template Known Secondary structure  T......S
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   321........330....... ..340.........350.........360.........370.........380.........390....
 
   399400.........410.........420.........430.........440.
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Query Sequence  IALMGASSFELAGTFIVSLIILMFYARKMHERQSHSMDNHTAS
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Template Sequence  WI. . TNRFVFYGIIATFIGVLIFEIIYRKVTKRTFSNNMYVKS
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GGGTTT
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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