Job Description P04425 Confidence 99.88% Date Thu Jan 5 10:58:17 GMT 2012 Rank 41 Aligned Residues 278 % Identity 15% Template c3uvzB_ PDB info PDB header:lyase Chain: B: PDB Molecule:phosphoribosylaminoimidazole carboxylase, atpase subunit; PDBTitle: crystal structure of phosphoribosylaminoimidazole carboxylase, atpase2 subunit from burkholderia ambifaria Resolution 2.20 Å

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		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	L	G	I	V	M	D	P	I	A	N	I	N	I	K	K	D	S	S	F	A	M	L	L	E	A	Q	R	R	G	Y	E	L	H	Y	M	E	M	G	D	L	Y	L	I	N	G	E	A	R	A	H	T	R	T	L	N	V	K	Q	N	Y	E	E	W	F	S	F	V	G	E	Q	D	L	P	L	A	D	L	D	V
Query Conservation
Alig confidence								.	.	.	.	.	.	.	.																										.	.																														.	.	.	.	.	.	.
Template Conservation								.	.	.	.	.	.	.	.																										.	.																														.	.	.	.	.	.	.
Template Sequence		W	L	G	M	V	G	.	.	.	.	.	.	.	.	G	G	Q	L	G	R	M	F	C	F	A	A	Q	S	M	G	Y	R	V	A	V	L	D	P	D	.	.	P	A	S	P	A	G	A	V	A	D	R	H	L	R	A	A	Y	D	D	E	A	A	L	A	E	L	A	G	L	.	.	.	.	.	.	.	C	E	A
Template Known Secondary structure								.	.	.	.	.	.	.	.		S													T	T								S		.	.	T	T		T	T	T	T	T	S	S					S		T	T												.	.	.	.	.	.	.		S
Template Predicted Secondary structure								.	.	.	.	.	.	.	.																										.	.																														.	.	.	.	.	.	.
Template SS confidence
		16	.	.	.	20	.									.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.			.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.								.	.	.
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.					.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																					.	.	.	.
Query SS confidence																																																					.	.	.	.
Query Sequence		I	L	M	R	K	D	P	P	F	D	T	E	F	I	Y	A	T	Y	I	L	E	R	A	E	E	K	G	T	L	I	V	N	K	P	Q	S	L	R	D	C	N	E	K	L	F	T	A	W	F	S	D	.	.	.	.	L	T	P	E	T	L	V	T	R	N	K	A	Q	L	K	A	F	W	E	K	H	S	D	I	I
Query Conservation																																																					.	.	.	.
Alig confidence											.	.	.	.	.	.	.	.																																			.	.	.	.
Template Conservation											.	.	.	.	.	.	.	.
Template Sequence		V	S	T	E	F	E	N	V	P	.	.	.	.	.	.	.	.	A	A	S	L	D	F	L	A	R	T	T	F	V	A	P	A	G	R	C	V	A	V	A	Q	D	R	I	A	E	K	R	F	I	E	A	S	G	V	P	V	A	P	H	V	V	I	E	S	A	A	A	L	A	A	L	D	D	A	A	L	D	A	V
Template Known Secondary structure					S		T	T	S		.	.	.	.	.	.	.	.									T	T	S			S	S										S											T	T			B		S						S						T								T	T
Template Predicted Secondary structure											.	.	.	.	.	.	.	.
Template SS confidence
		79	80	.	.	.	.	.	.	.									.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150
		159	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.		.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.
Predicted Secondary structure																																																									.
Query SS confidence																																																									.
Query Sequence		L	K	P	L	D	G	M	G	G	A	S	I	F	R	V	K	E	G	D	P	N	L	G	V	I	A	E	T	L	T	E	H	G	T	R	Y	C	M	A	Q	N	Y	L	P	A	I	K	D	G	D	K	R	V	L	V	.	V	D	G	E	P	V	P	Y	C	L	A	R	I	P	Q	G	G	E	T	R	G	N	L	A
Query Conservation																																																									.
Alig confidence																															.	.	.	.																							.
Template Conservation																															.	.	.	.
Template Sequence		L	P	G	I	L	K	T	A	R	K	G	Q	V	R	V	S	T	A	R	E	A	R	D	A	H	A	A	L	G	.	.	.	.	G	V	P	C	V	L	E	K	R	L	P	L	K	Y	E	V	S	A	L	I	A	R	G	A	D	G	R	S	A	A	F	P	L	A	Q	N	V	H	H	N	G	I	L	A	L	T	I
Template Known Secondary structure			S															S											T	T	.	.	.	.	T																							T	T	S														T	T
Template Predicted Secondary structure																															.	.	.	.
Template SS confidence
		151	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.					180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.
		238	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.				.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																										.	.	.
Query SS confidence																																										.	.	.
Query Sequence		A	G	G	R	G	E	P	R	P	L	T	E	S	D	W	K	I	A	R	Q	I	G	P	T	L	K	E	K	G	L	I	F	V	G	L	D	I	I	G	D	.	.	.	R	L	T	E	I	N	V	T	S	P	T	C	I	R	E	I	E	A	E	F	P	V	S	I	T	G	M	L	M	D	A	I
Query Conservation																																										.	.	.
Alig confidence																																										.	.	.
Template Conservation
Template Sequence		V	P	A	P	A	A	D	T	A	R	V	E	E	A	Q	Q	A	A	V	R	I	A	D	T	L	G	Y	V	G	V	L	C	V	E	F	F	V	L	E	D	G	S	F	V	A	N	E	M	A	P	R	P	H	N	S	G	H	Y	T	V	D	A	C	A	T	S	Q	F	E	Q	Q	V	R	A	M
Template Known Secondary structure			S		S	S																					T													T	T	S									S	S			G	G	G	T	T					B	S	S
Template Predicted Secondary structure
Template SS confidence
		232	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions