Job Description P04425 Confidence 99.87% Date Thu Jan 5 10:58:17 GMT 2012 Rank 47 Aligned Residues 282 % Identity 12% Template c3u9sE_ PDB info PDB header:ligase Chain: E: PDB Molecule:methylcrotonyl-coa carboxylase, alpha-subunit; PDBTitle: crystal structure of p. aeruginosa 3-methylcrotonyl-coa carboxylase2 (mcc) 750 kd holoenzyme, coa complex Resolution 3.50 Å

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		10	.	.	.	.	.	.	.	.	.	20			.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.			.	.	80	.	.	.	.	.
Predicted Secondary structure													.	.																																																										.	.
Query SS confidence													.	.																																																										.	.
Query Sequence		P	I	A	N	I	N	I	K	K	D	S	.	.	S	F	A	M	L	L	E	A	Q	R	R	G	Y	E	L	H	Y	M	E	M	G	D	L	Y	L	I	N	G	E	A	R	A	H	T	R	T	L	N	V	K	Q	N	Y	E	E	W	F	S	F	V	G	E	Q	D	L	P	L	.	.	A	D	L	D	V	I	L	M
Query Conservation													.	.																																																										.	.
Alig confidence													.	.																																																										.	.
Template Conservation
Template Sequence		S	I	Q	R	L	L	V	A	N	R	G	E	I	A	C	R	V	M	R	S	A	R	A	L	G	I	G	S	V	A	V	H	S	D	I	D	R	H	A	R	H	V	A	E	A	D	I	A	V	D	L	G	G	A	K	P	A	D	S	Y	L	R	G	D	R	I	I	A	A	A	L	A	S	G	A	Q	A	I	H	P
Template Known Secondary structure				S																					T	T									S	T	T	S	S		S	T	T	T	S	S	S								S	S	S	T	T	T	T	T												T	T
Template Predicted Secondary structure
Template SS confidence
		48	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.
		86	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.		.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.					.	.	.	.	.	.			140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.		.	.
Predicted Secondary structure																																.																			.	.	.	.							.	.																	.
Query SS confidence																																.																			.	.	.	.							.	.																	.
Query Sequence		R	K	D	P	P	F	D	T	E	F	I	Y	A	T	Y	I	L	E	R	A	E	E	K	G	T	L	I	V	N	K	.	P	Q	S	L	R	D	C	N	E	K	L	F	T	A	W	F	S	D	.	.	.	.	L	T	P	E	T	L	.	.	V	T	R	N	K	A	Q	L	K	A	F	W	E	K	H	S	.	D	I
Query Conservation																																.																			.	.	.	.							.	.																	.
Alig confidence											.	.	.	.	.																	.																			.	.	.	.							.	.																	.
Template Conservation											.	.	.	.	.
Template Sequence		G	Y	G	F	L	S	E	N	A	.	.	.	.	.	D	F	A	R	A	C	E	E	A	G	L	L	F	L	G	P	P	A	A	A	I	D	A	M	G	S	K	S	A	A	K	A	L	M	E	E	A	G	V	P	L	V	P	G	Y	H	G	E	A	Q	D	L	E	T	F	R	R	E	A	G	R	I	G	Y	P	V
Template Known Secondary structure			S	S	T	T	S	S		T	.	.	.	.	.								T	T	T				S	S	S								T	T	S										T	T	T									S	S				T	T								T	T		S
Template Predicted Secondary structure											.	.	.	.	.
Template SS confidence
		128	.	130	.	.	.	.	.	.						.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.
		158	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	L	K	P	L	D	G	M	G	G	A	S	I	F	R	V	K	E	G	D	P	N	L	G	V	I	A	E	T	L	T	E	H	G	T	R	Y	C	M	A	Q	N	Y	L	P	A	I	K	D	G	D	K	R	V	L	V	V	D	G	E	P	V	P	Y	C	L	A	R	I	P	Q	G	G	E	T	R	G	N	L	A
Query Conservation
Alig confidence						.	.	.	.	.	.														.	.	.	.																																															.	.
Template Conservation						.	.	.	.	.	.														.	.	.	.																																															.	.
Template Sequence		L	L	K	A	.	.	.	.	.	.	A	A	M	K	V	V	E	R	E	A	E	L	A	.	.	.	.	E	A	L	S	S	A	Q	R	A	R	M	L	V	E	K	Y	L	L	K	P	R	H	V	E	I	Q	V	F	A	D	R	H	G	H	C	L	Y	L	N	E	R	D	C	S	I	Q	.	.	R	R	H	Q	K
Template Known Secondary structure						.	.	.	.	.	.								S	S	G	G	G	T	.	.	.	.					S													S	S		B										T	T	S													B	.	.	S	S	S	S	B
Template Predicted Secondary structure						.	.	.	.	.	.														.	.	.	.																																															.	.
Template SS confidence
		203	.	.	.							.	.	.	210	.	.	.	.	.	.	.	.	.					220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.			.	.	.	.	270
		238	.	240	.	.	.	.	.	.	.	.	.	250	.	.		.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.		.	.	.	.	.	.						.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.
Predicted Secondary structure																	.																				.							.	.	.	.	.
Query SS confidence																	.																				.							.	.	.	.	.
Query Sequence		A	G	G	R	G	E	P	R	P	L	T	E	S	D	W	.	K	I	A	R	Q	I	G	P	T	L	K	E	K	G	L	I	F	V	G	.	L	D	I	I	G	D	.	.	.	.	.	R	L	T	E	I	N	V	T	S	P	T	C	I	R	E	I	E	A	E	F	P	V	S	I	T	G	M	L	M	D	A
Query Conservation																	.																				.							.	.	.	.	.
Alig confidence																	.																				.							.	.	.	.	.
Template Conservation
Template Sequence		V	V	E	E	A	P	A	P	G	L	G	A	E	L	R	R	A	M	G	E	A	A	V	R	A	A	Q	A	I	G	Y	V	G	A	G	T	V	E	F	L	L	D	E	R	G	Q	F	F	F	M	E	M	N	T	R	L	Q	V	E	H	P	V	T	E	A	I	T	G	L	D	L	V	A	W	Q	I	R	V
Template Known Secondary structure							S		S	S																				T	T			S								B		T	T	S									S	S			T	T									T
Template Predicted Secondary structure
Template SS confidence
		285	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions