Job Description P04425 Confidence 98.15% Date Thu Jan 5 10:58:17 GMT 2012 Rank 78 Aligned Residues 167 % Identity 21% Template c3tinA_ PDB info PDB header:ligase Chain: A: PDB Molecule:ttl protein; PDBTitle: tubulin tyrosine ligase Resolution 2.90 Å

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		112	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.											.	.	.	.	.	.	140	.	.		.	.	.	.	.	.	.	150	.	.	.	.	.	.							.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.
Predicted Secondary structure																								.	.	.	.	.	.	.	.	.	.										.															.	.	.	.	.	.
Query SS confidence																								.	.	.	.	.	.	.	.	.	.										.															.	.	.	.	.	.
Query Sequence		I	V	N	K	P	Q	S	L	R	D	C	N	E	K	L	F	T	A	W	F	S	D	.	.	.	.	.	.	.	.	.	.	L	T	P	E	T	L	V	T	R	.	N	K	A	Q	L	K	A	F	W	E	K	H	S	D	.	.	.	.	.	.	I	I	L	K	P	L	D	G	M	G	G	A	S	I	F	R	V	K
Query Conservation																								.	.	.	.	.	.	.	.	.	.										.															.	.	.	.	.	.
Alig confidence																								.	.	.	.	.	.	.	.	.	.										.															.	.	.	.	.	.						.	.	.	.
Template Conservation																																																																					.	.	.	.
Template Sequence		L	V	N	Y	Y	R	G	A	D	K	L	C	R	K	A	S	L	V	K	L	I	K	T	S	P	E	L	T	E	T	C	T	W	F	P	E	S	Y	V	I	Y	P	E	R	E	E	F	R	S	S	F	N	K	K	K	E	N	E	E	G	N	V	W	I	A	K	S	.	.	.	.	S	S	G	G	I	L	I	S	S
Template Known Secondary structure				S	S		T	T	T					S																T	T			S	S																						T	T	T	S									.	.	.	.	S								S
Template Predicted Secondary structure																																																																					.	.	.	.
Template SS confidence
		61	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.					.	.	130	.	.	.	.	.	.
		175	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.								.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.						.	.	.	.	.	230	.	.	.	.	.
Predicted Secondary structure																														.	.	.	.	.	.	.																							.	.	.	.	.												.	.	.	.	.	.	.
Query SS confidence																														.	.	.	.	.	.	.																							.	.	.	.	.												.	.	.	.	.	.	.
Query Sequence		E	G	D	P	N	L	G	V	I	A	E	T	L	T	E	H	G	T	R	Y	C	M	A	Q	N	Y	L	P	.	.	.	.	.	.	.	A	I	K	D	G	D	K	R	V	L	V	V	D	G	E	P	V	P	Y	C	L	A	.	.	.	.	.	R	I	P	Q	G	G	E	T	R	G	N	.	.	.	.	.	.	.
Query Conservation																														.	.	.	.	.	.	.																							.	.	.	.	.												.	.	.	.	.	.	.
Alig confidence														.	.	.	.	.												.	.	.	.	.	.	.																							.	.	.	.	.												.	.	.	.	.	.	.
Template Conservation														.	.	.	.	.
Template Sequence		D	A	T	E	L	L	D	F	I	D	N	Q	.	.	.	.	.	G	Q	V	H	V	I	Q	K	Y	L	E	S	P	L	L	L	E	P	G	H	R	K	F	D	I	R	S	W	V	L	V	D	N	Q	Y	N	I	Y	L	Y	R	E	G	V	L	R	T	S	S	E	G	N	E	M	F	F	E	E	F	N	Q	Y	L
Template Known Secondary structure			T					T	T	S	T	T	T	.	.	.	.	.	T	S									S	S	B			B	T	T	T	T	B												T	T							S																						T
Template Predicted Secondary structure														.	.	.	.	.
Template SS confidence
		165	.	.	.	.	170	.	.	.	.	.	.						.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.
		236	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.										.	.	270	.	.	.	.	.	.	.						.	.	280	.	.	.	.	.	.	.	.
Predicted Secondary structure																																		.	.	.	.	.	.	.	.	.											.	.	.	.	.
Query SS confidence																																		.	.	.	.	.	.	.	.	.											.	.	.	.	.
Query Sequence		L	A	A	G	G	R	G	E	P	R	P	L	T	E	S	D	W	K	I	A	R	Q	I	G	P	T	L	K	E	K	G	L	.	.	.	.	.	.	.	.	.	I	F	V	G	L	D	I	I	G	D	.	.	.	.	.	R	L	T	E	I	N	V	T	S	P	T
Query Conservation																																		.	.	.	.	.	.	.	.	.											.	.	.	.	.
Alig confidence																																		.	.	.	.	.	.	.	.	.											.	.	.	.	.							.
Template Conservation																																																																.
Template Sequence		V	T	S	L	N	I	N	L	E	N	S	I	L	C	Q	I	K	E	I	I	R	V	C	L	S	C	L	E	P	A	I	S	T	K	Y	L	P	Y	H	S	F	Q	L	F	G	F	D	F	M	V	D	K	N	L	K	V	W	L	I	E	V	N	.	G	A	P	A
Template Known Secondary structure		T	S	S	S	S	S		T	T	T	T															T	T							S	S	S	S	S													B	T	T										.	S	S
Template Predicted Secondary structure																																																																.
Template SS confidence
		272	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.		.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions