Job Description P04425 Confidence 99.89% Date Thu Jan 5 10:58:17 GMT 2012 Rank 40 Aligned Residues 274 % Identity 14% Template c3orqA_ PDB info PDB header:ligase,biosynthetic protein Chain: A: PDB Molecule:n5-carboxyaminoimidazole ribonucleotide synthetase; PDBTitle: crystal structure of n5-carboxyaminoimidazole synthetase from2 staphylococcus aureus complexed with adp Resolution 2.23 Å

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		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	L	G	I	V	M	D	P	I	A	N	I	N	I	K	K	D	S	S	F	A	M	L	L	E	A	Q	R	R	G	Y	E	L	H	Y	M	E	M	G	D	L	Y	L	I	N	G	E	A	R	A	H	T	R	T	L	N	V	K	Q	N	Y	E	E	W	F	S	F	V	G	E	Q	D	L	P	L	A	D	L	D	V
Query Conservation
Alig confidence								.	.	.	.	.	.	.	.																										.	.																												.	.	.	.	.	.	.
Template Conservation								.	.	.	.	.	.	.	.																										.	.																												.	.	.	.	.	.	.
Template Sequence		T	I	G	I	I	G	.	.	.	.	.	.	.	.	G	G	Q	L	G	K	X	X	A	Q	S	A	Q	K	X	G	Y	K	V	V	V	L	D	P	S	.	.	E	D	C	P	C	R	Y	V	A	H	E	F	I	Q	A	K	Y	D	D	E	K	A	L	N	Q	L	G	.	.	.	.	.	.	.	Q	K	C	D	V
Template Known Secondary structure								.	.	.	.	.	.	.	.		S													T	T								S		.	.	T	T		T	T	G	G	G	S	S							T	T										.	.	.	.	.	.	.				S
Template Predicted Secondary structure								.	.	.	.	.	.	.	.																										.	.																												.	.	.	.	.	.	.
Template SS confidence
		11	.	.	.	.	.									.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.			.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.								.	70	.	.	.
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.					.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.		.	.
Predicted Secondary structure																																																					.	.	.	.																							.
Query SS confidence																																																					.	.	.	.																							.
Query Sequence		I	L	M	R	K	D	P	P	F	D	T	E	F	I	Y	A	T	Y	I	L	E	R	A	E	E	K	G	T	L	I	V	N	K	P	Q	S	L	R	D	C	N	E	K	L	F	T	A	W	F	S	D	.	.	.	.	L	T	P	E	T	L	V	T	R	N	K	A	Q	L	K	A	F	W	E	K	H	S	.	D	I
Query Conservation																																																					.	.	.	.																							.
Alig confidence											.	.	.	.	.	.	.	.																																			.	.	.	.																							.
Template Conservation											.	.	.	.	.	.	.	.
Template Sequence		I	T	Y	E	F	E	N	I	S	.	.	.	.	.	.	.	.	A	Q	Q	L	K	L	L	C	E	K	Y	N	I	P	Q	G	Y	Q	A	I	Q	L	L	Q	D	R	L	T	E	K	E	T	L	K	S	A	G	T	K	V	V	P	F	I	S	V	K	E	S	T	D	I	D	K	A	I	E	T	L	G	Y	P	F
Template Known Secondary structure					S	S	T	T	S		.	.	.	.	.	.	.	.											S			T	T	T	T								S											T	T			B								S	S	T									T		S	S
Template Predicted Secondary structure											.	.	.	.	.	.	.	.
Template SS confidence
		74	.	.	.	.	.	80	.	.									.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.
		158	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.		.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.
Predicted Secondary structure																																																										.
Query SS confidence																																																										.
Query Sequence		I	L	K	P	L	D	G	M	G	G	A	S	I	F	R	V	K	E	G	D	P	N	L	G	V	I	A	E	T	L	T	E	H	G	T	R	Y	C	M	A	Q	N	Y	L	P	A	I	K	D	G	D	K	R	V	L	V	.	V	D	G	E	P	V	P	Y	C	L	A	R	I	P	Q	G	G	E	T	R	G	N	L
Query Conservation																																																										.
Alig confidence																																	.	.	.																							.
Template Conservation																																	.	.	.
Template Sequence		I	V	K	T	R	F	G	G	Y	D	G	K	G	Q	V	L	I	N	N	E	K	D	L	Q	E	G	F	K	L	I	E	.	.	.	T	S	E	C	V	A	E	K	Y	L	N	I	K	K	E	V	S	L	T	V	T	R	G	N	N	N	Q	I	T	F	F	P	L	Q	E	N	E	H	R	N	Q	I	L	F	K	T
Template Known Secondary structure						S	S	S			T	T	T	T						S	T	T	S									T	.	.	.	T	S																						G	G	G														T	T
Template Predicted Secondary structure																																	.	.	.
Template SS confidence
		146	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.				.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.
		237	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.						.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																											.	.	.	.	.
Query SS confidence																																											.	.	.	.	.
Query Sequence		A	A	G	G	R	G	E	P	R	P	L	T	E	S	D	W	K	I	A	R	Q	I	G	P	T	L	K	E	K	G	L	I	F	V	G	L	D	I	I	G	D	.	.	.	.	.	R	L	T	E	I	N	V	T	S	P	T	C	I	R	E	I	E	A	E	F	P	V	S	I	T	G	M	L	M	D	A	I
Query Conservation																																											.	.	.	.	.
Alig confidence						.	.	.																										.	.								.	.	.	.	.
Template Conservation						.	.	.																										.	.
Template Sequence		I	V	P	A	.	.	.	R	I	D	K	T	A	E	A	K	E	Q	V	N	K	I	I	Q	S	I	H	F	I	G	T	F	.	.	T	V	E	F	F	I	D	S	N	N	Q	L	Y	V	N	E	I	A	P	R	P	H	N	S	G	H	Y	S	I	E	A	C	D	Y	S	Q	F	D	T	H	I	L	A	V
Template Known Secondary structure				S		.	.	.	S	S															T	T	S							.	.								T	T										S	S			G	G	G	T	T					B	S	S
Template Predicted Secondary structure						.	.	.																										.	.
Template SS confidence
		223	.	.	.				.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.			.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions