Job Description P04425 Confidence 98.25% Date Thu Jan 5 10:58:17 GMT 2012 Rank 77 Aligned Residues 208 % Identity 19% Template c3n6xA_ PDB info PDB header:ligase Chain: A: PDB Molecule:putative glutathionylspermidine synthase; PDBTitle: crystal structure of a putative glutathionylspermidine synthase2 (mfla_0391) from methylobacillus flagellatus kt at 2.35 a resolution Resolution 2.35 Å

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		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	L	G	I	V	M	D	P	I	A	N	I	N	I	K	K	D	S	S	F	A	M	L	L	E	A	Q	R	R	G	Y	E	L	H	Y	M	E	M	G	D	L	Y	L	I	N	G	E	A	R	A	H	T	R	T	L	N	V	K	Q	N	Y	E	E	W	F	S	F	V	G	E	Q	D	L	P	L	A	D	L	D	V
Query Conservation
Alig confidence							.	.	.	.	.	.	.																																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation							.	.	.	.	.	.	.																																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		T	V	V	L	L	.	.	.	.	.	.	.	T	P	G	A	Y	N	S	A	Y	F	E	H	A	F	I	A	Q	Q	X	G	I	E	L	V	E	G	Q	D	L	F	V	R	N	N	A	V	Y	X	R	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	E	G	P	K	R	V	D	V
Template Known Secondary structure							.	.	.	.	.	.	.				S	S	S	T	T												T						G	G	G					S	S							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	T
Template Predicted Secondary structure							.	.	.	.	.	.	.																																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		218	.	220	.	.								.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.																				.	.	.	.	.	.	.	270	.
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100								.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.													.	.	.	.	.	.	140	.	.	.
Predicted Secondary structure																				.	.	.	.	.	.	.																																		.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																				.	.	.	.	.	.	.																																		.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		I	L	M	R	K	D	P	P	F	D	T	E	F	I	Y	A	T	Y	.	.	.	.	.	.	.	I	L	E	R	A	E	E	K	G	T	L	I	V	N	K	P	Q	S	L	R	D	C	N	E	K	L	F	T	A	W	F	S	D	.	.	.	.	.	.	.	.	.	.	.	.	L	T	P	E	T	L	V	T	R	N
Query Conservation																				.	.	.	.	.	.	.																																		.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																				.	.	.	.	.	.	.																			.															.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																													.
Template Sequence		I	Y	R	R	I	D	D	D	F	I	D	P	L	S	F	R	P	D	S	X	L	G	V	P	G	L	L	S	V	Y	R	N	G	G	V	T	L	A	N	A	V	G	T	.	G	V	A	D	D	K	D	T	Y	I	Y	V	P	E	X	I	R	F	Y	L	G	E	E	P	I	L	S	N	V	P	T	Y	Q	L	S	K
Template Known Secondary structure						S		G	G	G	S		T	T	T	S		T	T		S	S	S		T	T							T	T	S					S		T	T	T	.					S	T	T	T	G	G	G											S			S	S								T	T	S
Template Predicted Secondary structure																																													.
Template SS confidence
		272	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.		.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
		144	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.													.	.	.	.	.	.	.	210	.
Predicted Secondary structure																																																													.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																													.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		K	A	Q	L	K	A	F	W	E	K	H	S	D	I	I	L	K	P	L	D	G	M	G	G	A	S	I	F	R	V	K	E	G	D	P	N	L	G	V	I	A	E	T	L	T	E	H	G	T	R	Y	C	M	A	Q	N	Y	L	P	.	.	.	.	.	.	.	.	.	.	.	.	A	I	K	D	G	D	K	R	V
Query Conservation																																																													.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																							.	.	.	.																								.											.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																							.	.	.	.																								.
Template Sequence		A	D	D	L	K	Y	V	L	D	N	L	A	E	L	V	V	K	E	V	Q	G	.	.	.	.	X	L	V	G	P	A	A	S	K	Q	E	L	E	D	F	R	Q	R	I	L	A	N	P	.	A	N	Y	I	A	Q	P	T	L	A	L	S	T	C	P	T	L	V	E	T	G	I	A	P	R	H	V	D	L	R	P
Template Known Secondary structure											S	G	G	G									.	.	.	.				G	G	G																S	G	.	G	G																	T	T
Template Predicted Secondary structure																							.	.	.	.																								.
Template SS confidence
		351	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.					.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.		.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.
		212	.	.	.	.	.	.	.					220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.
Predicted Secondary structure										.	.	.	.
Query SS confidence										.	.	.	.
Query Sequence		L	V	V	D	G	E	P	V	.	.	.	.	P	Y	C	L	A	R	I	P	Q	G	G	E	T	R	G	N	L	A	A	G	G	R	G
Query Conservation										.	.	.	.
Alig confidence										.	.	.	.
Template Conservation
Template Sequence		F	V	L	S	G	K	T	V	S	L	V	P	G	A	L	C	R	V	A	L	R	E	G	S	L	V	V	N	S	S	Q	G	G	G	T
Template Known Secondary structure						S	S	S					S									S	T	T					S	T	T	S	S
Template Predicted Secondary structure
Template SS confidence
		431	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions