Job Description P04425 Confidence 99.85% Date Thu Jan 5 10:58:17 GMT 2012 Rank 56 Aligned Residues 271 % Identity 10% Template c3n6rK_ PDB info PDB header:ligase Chain: K: PDB Molecule:propionyl-coa carboxylase, alpha subunit; PDBTitle: crystal structure of the holoenzyme of propionyl-coa carboxylase (pcc) Resolution 3.20 Å

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		21	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.			.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																							.	.
Query SS confidence																																																							.	.
Query Sequence		S	F	A	M	L	L	E	A	Q	R	R	G	Y	E	L	H	Y	M	E	M	G	D	L	Y	L	I	N	G	E	A	R	A	H	T	R	T	L	N	V	K	Q	N	Y	E	E	W	F	S	F	V	G	E	Q	.	.	D	L	P	L	A	D	L	D	V	I	L	M	R	K	D	P	P	F	D	T	E	F	I	Y	A
Query Conservation																																																							.	.
Alig confidence																																																							.	.																					.	.	.	.	.
Template Conservation																																																																													.	.	.	.	.
Template Sequence		A	C	R	V	I	K	T	A	R	K	M	G	I	S	T	V	A	I	Y	S	D	A	D	K	Q	A	L	H	V	Q	M	A	D	E	A	V	H	I	G	P	P	P	A	N	Q	S	Y	I	V	I	D	K	V	M	A	A	I	R	A	T	G	A	Q	A	V	H	P	G	Y	G	F	L	S	E	N	.	.	.	.	.
Template Known Secondary structure										G	G	G	S			B						S	T	T	S	S							S	S						S	S	S	S	G	G	G	T	T	S												T			S			B			S	S	S	S	T	T		.	.	.	.	.
Template Predicted Secondary structure																																																																													.	.	.	.	.
Template SS confidence
		75	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.
		99	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.		.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.					.	.	.	.	.	.	140	.			.	.	.	.	.	.	.	.	150	.	.	.	.	.		.	.	.	.	160	.	.	.	.	.	.	.	.	.	170
Predicted Secondary structure																			.																			.	.	.	.									.	.															.
Query SS confidence																			.																			.	.	.	.									.	.															.
Query Sequence		T	Y	I	L	E	R	A	E	E	K	G	T	L	I	V	N	K	.	P	Q	S	L	R	D	C	N	E	K	L	F	T	A	W	F	S	D	.	.	.	.	L	T	P	E	T	L	V	T	.	.	R	N	K	A	Q	L	K	A	F	W	E	K	H	S	.	D	I	I	L	K	P	L	D	G	M	G	G	A	S	I
Query Conservation																			.																			.	.	.	.									.	.															.
Alig confidence																			.																			.	.	.	.									.	.															.							.	.	.	.	.	.
Template Conservation																																																																									.	.	.	.	.	.
Template Sequence		S	K	F	A	E	A	L	E	A	E	G	V	I	F	V	G	P	P	K	G	A	I	E	A	M	G	D	K	I	T	S	K	K	I	A	Q	E	A	N	V	S	T	V	P	G	Y	M	G	L	I	E	D	A	D	E	A	V	K	I	S	N	Q	I	G	Y	P	V	M	I	K	A	.	.	.	.	.	.	S	A	M
Template Known Secondary structure										T	T	T				S	S	S								T	T	S										T	T	T													S													S	S						.	.	.	.	.	.
Template Predicted Secondary structure																																																																									.	.	.	.	.	.
Template SS confidence
		150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220							.	.	.
		171	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250
Predicted Secondary structure
Query SS confidence
Query Sequence		F	R	V	K	E	G	D	P	N	L	G	V	I	A	E	T	L	T	E	H	G	T	R	Y	C	M	A	Q	N	Y	L	P	A	I	K	D	G	D	K	R	V	L	V	V	D	G	E	P	V	P	Y	C	L	A	R	I	P	Q	G	G	E	T	R	G	N	L	A	A	G	G	R	G	E	P	R	P	L	T	E	S
Query Conservation
Alig confidence																		.	.	.	.																																									.	.
Template Conservation																		.	.	.	.																																									.	.
Template Sequence		R	I	A	W	N	D	Q	E	A	R	E	G	F	Q	S	S	.	.	.	.	K	N	D	R	I	F	I	E	K	F	V	T	Q	P	R	H	I	E	I	Q	V	L	C	D	S	H	G	N	G	I	Y	L	G	E	R	E	C	S	I	Q	.	.	R	R	N	Q	K	V	V	E	E	A	P	S	P	F	L	D	E	A
Template Known Secondary structure				B		S												.	.	.	.	T											S	S												T	T	S														.	.		T	T								S		S	S
Template Predicted Secondary structure																		.	.	.	.																																									.	.
Template SS confidence
		230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.					.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.			.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.
		251	.		.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.		.	.	.	.	.	.						.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.
Predicted Secondary structure				.																				.							.	.	.	.	.
Query SS confidence				.																				.							.	.	.	.	.
Query Sequence		D	W	.	K	I	A	R	Q	I	G	P	T	L	K	E	K	G	L	I	F	V	G	.	L	D	I	I	G	D	.	.	.	.	.	R	L	T	E	I	N	V	T	S	P	T	C	I	R	E	I	E	A	E	F	P	V	S	I	T	G	M	L	M	D	A
Query Conservation				.																				.							.	.	.	.	.
Alig confidence				.																				.							.	.	.	.	.
Template Conservation
Template Sequence		T	R	R	A	M	G	E	Q	A	V	A	L	A	K	A	V	G	Y	A	S	A	G	T	V	E	F	I	V	D	G	Q	K	N	F	Y	F	L	E	M	N	T	R	L	Q	V	E	H	P	V	T	E	L	I	T	G	V	D	L	V	E	Q	M	I	R	V
Template Known Secondary structure																T	T	T			S										T	T	S										S			T	T									T
Template Predicted Secondary structure
Template SS confidence
		312	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions