Job Description P04425 Confidence 99.93% Date Thu Jan 5 10:58:17 GMT 2012 Rank 24 Aligned Residues 285 % Identity 16% Template c3lp8A_ PDB info PDB header:ligase Chain: A: PDB Molecule:phosphoribosylamine-glycine ligase; PDBTitle: crystal structure of phosphoribosylamine-glycine ligase from2 ehrlichia chaffeensis Resolution 2.15 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	K	L	G	I	V	M	D	P	I	A	N	I	N	I	K	K	D	S	S	F	A	M	L	L	E	A	Q	R	R	G	Y	E	L	H	Y	M	E	M	G	D	L	Y	L	I	N	G	E	A	R	A	H	T	R	T	L	N	V	K	Q	N	Y	E	E	W	F	S	F	V	G	E	Q	D	L	P	L	A	D	L	D
Query Conservation
Alig confidence														.	.	.	.	.	.	.	.																			.	.	.	.																																.	.	.	.
Template Conservation														.	.	.	.	.	.	.	.																			.	.	.	.																																.	.	.	.
Template Sequence		M	N	V	L	V	I	G	S	G	G	R	E	.	.	.	.	.	.	.	.	H	S	M	L	H	H	I	R	K	S	T	L	L	N	K	L	F	I	.	.	.	.	A	P	G	R	E	G	M	S	G	L	A	D	I	I	D	I	D	I	N	S	T	I	E	V	I	Q	V	C	K	K	E	.	.	.	.	K	I	E
Template Known Secondary structure										S				.	.	.	.	.	.	.	.								T	T		T	T							.	.	.	.					G	G	G	T	T	T	S							T	T												T	.	.	.	.	T
Template Predicted Secondary structure														.	.	.	.	.	.	.	.																			.	.	.	.																																.	.	.	.
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.									.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30					.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.					.	.	.
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.		.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.					.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.
Predicted Secondary structure																																		.																					.	.	.	.																							.
Query SS confidence																																		.																					.	.	.	.																							.
Query Sequence		V	I	L	M	R	K	D	P	P	F	D	T	E	F	I	Y	A	T	Y	I	L	E	R	A	E	E	K	G	T	L	I	V	.	N	K	P	Q	S	L	R	D	C	N	E	K	L	F	T	A	W	F	S	D	.	.	.	.	L	T	P	E	T	L	V	T	R	N	K	A	Q	L	K	A	F	W	E	K	H	S	.
Query Conservation																																		.																					.	.	.	.																							.
Alig confidence						.	.	.	.	.	.																							.																					.	.	.	.																							.
Template Conservation						.	.	.	.	.	.
Template Sequence		L	V	V	I	.	.	.	.	.	.	G	P	E	T	P	L	M	N	G	L	S	D	A	L	T	E	E	G	I	L	V	F	G	P	S	K	A	A	A	R	L	E	S	S	K	G	F	T	K	E	L	C	M	R	Y	G	I	P	T	A	K	Y	G	Y	F	V	D	T	N	S	A	Y	K	F	I	D	K	H	K	L
Template Known Secondary structure						.	.	.	.	.	.		S						T	T								T	T					S																							T			B							S	S											S		S
Template Predicted Secondary structure						.	.	.	.	.	.
Template SS confidence
		65	.	.	.							.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.
		156	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.					.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.		.	230
Predicted Secondary structure																																							.	.	.	.																																					.
Query SS confidence																																							.	.	.	.																																					.
Query Sequence		D	I	I	L	K	P	L	D	G	M	G	G	A	S	I	F	R	V	K	E	G	D	P	N	L	G	V	I	A	E	T	L	T	E	H	G	T	.	.	.	.	R	Y	C	M	A	Q	N	Y	L	P	A	I	K	D	G	D	K	R	V	L	V	V	D	G	E	P	V	P	Y	C	L	A	R	I	P	Q	.	G	G
Query Conservation																																							.	.	.	.																																					.
Alig confidence																																							.	.	.	.										.																											.
Template Conservation																																																				.
Template Sequence		P	L	V	V	K	A	D	G	L	A	Q	G	K	G	T	V	I	C	H	T	H	E	E	A	Y	N	A	V	D	A	M	L	V	H	H	K	F	G	E	A	G	C	A	I	I	I	E	E	F	L	.	E	G	K	E	I	S	F	F	T	L	V	D	G	S	N	P	V	I	L	G	V	A	Q	D	Y	K	T	I	G
Template Known Secondary structure		S						S	S			T	T	T	S					S	S													T	S		T	T	G	G	G	G	S	S								.		S											S	S
Template Predicted Secondary structure																																																				.
Template SS confidence
		139	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.		.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.
		231	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.									.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.				.	.	.					.	.	.	.	280	.	.	.	.	.	.	.	.	.		290	.	.	.	.
Predicted Secondary structure																				.	.	.	.	.	.	.	.																									.	.	.				.	.	.	.															.
Query SS confidence																				.	.	.	.	.	.	.	.																									.	.	.				.	.	.	.															.
Query Sequence		E	T	R	G	N	L	A	A	G	G	R	G	E	P	R	P	L	T	.	.	.	.	.	.	.	.	E	S	D	W	K	I	A	R	Q	I	G	P	T	L	K	E	K	G	L	I	F	V	G	L	.	.	.	D	I	I	.	.	.	.	G	D	R	L	T	E	I	N	V	T	S	P	T	C	.	I	R	E	I	E
Query Conservation																				.	.	.	.	.	.	.	.																									.	.	.				.	.	.	.															.
Alig confidence																				.	.	.	.	.	.	.	.																									.	.	.				.	.	.	.															.
Template Conservation
Template Sequence		D	N	N	K	G	P	N	T	G	G	M	G	S	Y	S	K	P	N	I	I	T	Q	E	M	E	H	I	I	I	Q	K	I	I	Y	P	T	I	K	A	M	F	N	M	N	I	Q	F	R	G	L	L	F	A	G	I	I	I	K	K	N	E	P	K	L	L	E	Y	N	V	R	F	G	D	P	E	T	Q	S	I	L
Template Known Secondary structure		G	G	G						S		S						T	T	S	S												T											T	T															T	T									S	S			T	T						G
Template Predicted Secondary structure
Template SS confidence
		218	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.
		295	.	.	.	.	300	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	E	F	P	V	S	I	T	G	M	L	M	D	A	I
Query Conservation
Alig confidence
Template Conservation
Template Sequence		P	R	L	N	S	D	F	L	K	L	L	S	L	T	A
Template Known Secondary structure		G	G	B		S
Template Predicted Secondary structure
Template SS confidence
		298	.	300	.	.	.	.	.	.	.	.	.	310	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions