Job Description P04425 Confidence 99.95% Date Thu Jan 5 10:58:17 GMT 2012 Rank 8 Aligned Residues 292 % Identity 15% Template c3bg5C_ PDB info PDB header:ligase Chain: C: PDB Molecule:pyruvate carboxylase; PDBTitle: crystal structure of staphylococcus aureus pyruvate2 carboxylase Resolution 2.80 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																																																.	.
Query SS confidence																																																																																.	.
Query Sequence		M	I	K	L	G	I	V	M	D	P	I	A	N	I	N	I	K	K	D	S	S	F	A	M	L	L	E	A	Q	R	R	G	Y	E	L	H	Y	M	E	M	G	D	L	Y	L	I	N	G	E	A	R	A	H	T	R	T	L	N	V	K	Q	N	Y	E	E	W	F	S	F	V	G	E	Q	D	L	P	L	A	.	.
Query Conservation																																																																																.	.
Alig confidence										.	.	.	.	.	.	.	.																																																															.	.
Template Conservation										.	.	.	.	.	.	.	.
Template Sequence		I	K	K	L	L	V	A	N	.	.	.	.	.	.	.	.	R	G	E	I	A	I	R	I	F	R	A	A	A	E	L	D	I	S	T	V	A	I	Y	S	N	E	D	K	S	S	L	H	R	Y	K	A	D	E	S	Y	L	V	G	S	D	L	G	P	A	E	S	Y	L	N	I	E	R	I	I	D	V	A	K	Q
Template Known Secondary structure								S		.	.	.	.	.	.	.	.															T	T									S	T	T	T	T		G	G	G	G	S	S	S							S	S			S	S	S	T	T	T											T
Template Predicted Secondary structure										.	.	.	.	.	.	.	.
Template SS confidence
		37	.	.	40	.	.	.	.									.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.
			79	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.		.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.					.	.	.	.			.	.	140	.	.	.	.	.	.	.	.	.	150
Predicted Secondary structure		.																																						.																			.	.	.	.					.	.
Query SS confidence		.																																						.																			.	.	.	.					.	.
Query Sequence		.	D	L	D	V	I	L	M	R	K	D	P	P	F	D	T	E	F	I	Y	A	T	Y	I	L	E	R	A	E	E	K	G	T	L	I	V	N	K	.	P	Q	S	L	R	D	C	N	E	K	L	F	T	A	W	F	S	D	.	.	.	.	L	T	P	E	.	.	T	L	V	T	R	N	K	A	Q	L	K	A	F
Query Conservation		.																																						.																			.	.	.	.					.	.
Alig confidence		.																	.	.	.	.	.																	.																			.	.	.	.					.	.
Template Conservation																			.	.	.	.	.
Template Sequence		A	N	V	D	A	I	H	P	G	Y	G	F	L	S	E	N	E	.	.	.	.	.	Q	F	A	R	R	C	A	E	E	G	I	K	F	I	G	P	H	L	E	H	L	D	M	F	G	D	K	V	K	A	R	T	T	A	I	K	A	D	L	P	V	I	P	G	T	D	G	P	I	K	S	Y	E	L	A	K	E	F
Template Known Secondary structure		T	T								S	S	S	S	T	T			.	.	.	.	.									T	T				S	S	S									S	S											T	T			B					S	S				T	T
Template Predicted Secondary structure																			.	.	.	.	.
Template SS confidence
		109	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.						.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.
		151	.	.	.	.		.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.					.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.
Predicted Secondary structure							.																													.	.	.	.
Query SS confidence							.																													.	.	.	.
Query Sequence		W	E	K	H	S	.	D	I	I	L	K	P	L	D	G	M	G	G	A	S	I	F	R	V	K	E	G	D	P	N	L	G	V	I	.	.	.	.	A	E	T	L	T	E	H	G	T	R	Y	C	M	A	Q	N	Y	L	P	A	I	K	D	G	D	K	R	V	L	V	V	D	G	E	P	V	P	Y	C	L	A	R
Query Conservation							.																													.	.	.	.
Alig confidence							.																													.	.	.	.
Template Conservation
Template Sequence		A	E	E	A	G	F	P	L	M	I	K	A	T	S	G	G	G	G	K	G	M	R	I	V	R	E	E	S	E	L	E	D	A	F	H	R	A	K	S	E	A	E	K	S	F	G	N	S	E	V	Y	I	E	R	Y	I	D	N	P	K	H	I	E	V	Q	V	I	G	D	E	H	G	N	I	V	H	L	F	E	R
Template Known Secondary structure				S	S		S							S	S				G	G	G						S	T	T	T																S	S											S	S												T	T	S
Template Predicted Secondary structure
Template SS confidence
		184	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.
		226	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.		.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.		.	.	.	.	.	.					.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																													.																				.							.	.	.	.
Query SS confidence																													.																				.							.	.	.	.
Query Sequence		I	P	Q	G	G	E	T	R	G	N	L	A	A	G	G	R	G	E	P	R	P	L	T	E	S	D	W	.	K	I	A	R	Q	I	G	P	T	L	K	E	K	G	L	I	F	V	G	.	L	D	I	I	G	D	.	.	.	.	R	L	T	E	I	N	V	T	S	P	T	C	I	R	E	I	E	A	E	F	P	V
Query Conservation																													.																				.							.	.	.	.
Alig confidence							.	.																					.																				.							.	.	.	.
Template Conservation							.	.
Template Sequence		D	C	S	V	Q	.	.	R	R	H	Q	K	V	V	E	V	A	P	S	V	G	L	S	P	T	L	R	Q	R	I	C	D	A	A	I	Q	L	M	E	N	I	K	Y	V	N	A	G	T	V	E	F	L	V	S	G	D	E	F	F	F	I	E	V	N	P	R	V	Q	V	E	H	T	I	T	E	M	V	T	G	I
Template Known Secondary structure							.	.	S	S	S								S		S	S																				T	T													T	T										S			T	T
Template Predicted Secondary structure							.	.
Template SS confidence
		264	.	.	.	.			.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.
		300	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	I	T	G	M	L	M	D
Query Conservation
Alig confidence
Template Conservation
Template Sequence		D	I	V	K	T	Q	I	L
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		343	.	.	.	.	.	.	350

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions