Job Description P04425 Confidence 94.06% Date Thu Jan 5 10:58:17 GMT 2012 Rank 93 Aligned Residues 161 % Identity 13% Template c2vpmB_ PDB info PDB header:ligase Chain: B: PDB Molecule:trypanothione synthetase; PDBTitle: trypanothione synthetase Resolution 2.8 Å

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		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.		.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
Predicted Secondary structure																																						.
Query SS confidence																																						.
Query Sequence		K	L	G	I	V	M	D	P	I	A	N	I	N	I	K	K	D	S	S	F	A	M	L	L	E	A	Q	R	R	G	Y	E	L	H	Y	M	.	E	M	G	D	L	Y	L	I	N	G	E	A	R	A	H	T	R	T	L	N	V	K	Q	N	Y	E	E	W	F	S	F	V	G	E	Q	D	L	P	L	A	D	L	D
Query Conservation																																						.
Alig confidence													.	.	.																							.																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation													.	.	.																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		R	V	H	F	C	V	D	E	E	R	E	.	.	.	E	Q	Y	T	A	L	Y	C	M	Q	A	A	E	A	V	G	L	E	G	K	L	C	I	L	F	D	E	F	R	F	D	D	N	G	H	V	V	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	D	G	V	R	V	R
Template Known Secondary structure									S				.	.	.														T	T	T								T	T	T	T					T	T	S					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	T			B
Template Predicted Secondary structure													.	.	.																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		397	.	.	400	.	.	.	.	.	.	.				.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.																						.	.	.	.	450	.	.
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.																							.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.
Predicted Secondary structure																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																										.	.	.	.	.	.
Query SS confidence																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																										.	.	.	.	.	.
Query Sequence		V	I	L	M	R	K	D	P	P	F	D	T	E	F	I	Y	A	T	Y	I	L	E	R	A	E	E	K	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	T	L	I	V	N	K	P	Q	S	L	R	D	C	N	E	K	L	F	T	A	W	F	S	D	.	.	.	.	.	.
Query Conservation																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																										.	.	.	.	.	.
Alig confidence					.	.	.	.																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												.														.	.	.	.	.	.
Template Conservation					.	.	.	.																																																						.
Template Sequence		N	V	W	.	.	.	.	K	T	W	M	W	E	S	A	I	T	D	Y	Y	A	A	R	E	E	R	G	E	N	W	K	P	S	P	K	D	K	V	R	L	C	D	L	L	L	G	D	D	W	E	I	L	Y	F	E	P	M	W	K	V	.	I	P	S	N	K	A	I	L	P	M	I	Y	H	N	H	P	E	H	P
Template Known Secondary structure					.	.	.	.		S	S																		T	T					T	T	S	B								S	S	S		T	T	S				S		G	G	G	G	.	T	T	T	S	G	G	G									T	T		T
Template Predicted Secondary structure					.	.	.	.																																																						.
Template SS confidence
		453	.	.					.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.		.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.
		134	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.					.	.	.	.	.	.	.
Predicted Secondary structure																																																																							.	.	.	.
Query SS confidence																																																																							.	.	.	.
Query Sequence		L	T	P	E	T	L	V	T	R	N	K	A	Q	L	K	A	F	W	E	K	H	S	D	I	I	L	K	P	L	D	G	M	G	G	A	S	I	F	R	V	K	E	G	D	P	N	L	G	V	I	A	E	T	L	T	E	H	G	T	R	Y	C	M	A	Q	N	Y	L	P	.	.	.	.	A	I	K	D	G	D	K
Query Conservation																																																																							.	.	.	.
Alig confidence																	.	.	.	.	.	.												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.								.	.	.	.
Template Conservation																	.	.	.	.	.	.												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		A	I	L	K	A	E	Y	E	L	T	D	E	L	R	K	.	.	.	.	.	.	H	G	Y	A	K	K	P	I	V	N	M	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	I	Y	Q	Q	L	F	E	L	K	K	Q	D	D	Y	Y	A	I	I
Template Known Secondary structure		T						S	S								.	.	.	.	.	.												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.											B	T	T	B
Template Predicted Secondary structure																	.	.	.	.	.	.												.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		528	.	530	.	.	.	.	.	.	.	.	.	540	.	.							.	.	.	.	.	.	.	550	.	.	.																															.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.
		210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	V	L	V	V	D	G	E	P	V	P	Y	C	L	A	R	I	P	Q	G
Query Conservation
Alig confidence											.
Template Conservation											.
Template Sequence		G	G	W	M	I	G	D	A	F	.	S	G	T	G	I	R	E	D	K	S
Template Known Secondary structure							T	T			.									S	S
Template Predicted Secondary structure											.
Template SS confidence
		599	600	.	.	.	.	.	.	.		.	.	610	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions