Job Description P04425 Confidence 90.03% Date Thu Jan 5 10:58:17 GMT 2012 Rank 96 Aligned Residues 256 % Identity 13% Template c2r7mA_ PDB info PDB header:ligase Chain: A: PDB Molecule:5-formaminoimidazole-4-carboxamide-1-(beta)-d- PDBTitle: crystal structure of faicar synthetase (purp) from m.2 jannaschii complexed with amp Resolution 2.30 Å

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		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	L	G	I	V	M	D	P	I	A	N	I	N	I	K	K	D	S	S	F	A	M	L	L	E	A	Q	R	R	G	Y	E	L	H	Y	M	E	M	G	D	L	Y	L	I	N	G	E	A	R	A	H	T	R	T	L	N	V	K	Q	N	Y	E	E	W	F	S	F	V	G	E	Q	D	L	P	L	A	D	L	D	V
Query Conservation
Alig confidence							.	.	.	.	.	.	.	.	.																																																				.	.	.
Template Conservation							.	.	.	.	.	.	.	.	.																																																				.	.	.
Template Sequence		T	I	A	T	L	.	.	.	.	.	.	.	.	.	G	S	H	T	S	L	H	I	L	K	G	A	K	L	E	G	F	S	T	V	C	I	T	M	K	G	R	D	V	P	Y	K	R	F	K	V	A	D	K	F	I	Y	V	D	N	F	S	D	I	K	N	.	.	.	E	E	I	Q	E	K	L	R	E	L	N	S
Template Known Secondary structure							.	.	.	.	.	.	.	.	.	S	S	T	T											T	T									T	T	S							T	T			S						S	S	G	G	G	G	G	S	.	.	.										T	T
Template Predicted Secondary structure							.	.	.	.	.	.	.	.	.																																																				.	.	.
Template SS confidence
		20	.	.	.	.										.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.				.	.	.	.	80	.	.	.	.	.	.	.
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.		.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.			.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																										.																													.	.
Query SS confidence																										.																													.	.
Query Sequence		I	L	M	R	K	D	P	P	F	D	T	E	F	I	Y	A	T	Y	I	L	E	R	A	E	.	E	K	G	T	L	I	V	N	K	P	Q	S	L	R	D	C	N	E	K	L	F	T	A	W	F	S	D	L	.	.	T	P	E	T	L	V	T	R	N	K	A	Q	L	K	A	F	W	E	K	H	S	D	I	I	L
Query Conservation																										.																													.	.
Alig confidence				.	.	.	.	.	.																	.																													.	.															.	.	.	.	.	.
Template Conservation				.	.	.	.	.	.																																																														.	.	.	.	.	.
Template Sequence		I	V	.	.	.	.	.	.	V	P	H	G	S	F	I	A	Y	C	G	L	D	N	V	E	N	S	F	L	V	P	M	F	G	N	R	R	I	L	R	W	E	S	E	R	S	L	E	G	K	L	L	R	E	A	G	L	R	V	P	K	K	Y	E	S	P	E	D	I	D	.	.	.	.	.	.	G	T	V	I	V
Template Known Secondary structure				.	.	.	.	.	.			B															T			S		B	B	S		G	G	G	G																T	T								S	S	G	G	G			.	.	.	.	.	.	S
Template Predicted Secondary structure				.	.	.	.	.	.																																																														.	.	.	.	.	.
Template SS confidence
		88	.							90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150							.	.	.	.	.
		160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.						.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.				.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.
Predicted Secondary structure																																					.	.	.	.	.																					.	.	.
Query SS confidence																																					.	.	.	.	.																					.	.	.
Query Sequence		K	P	L	D	G	M	G	G	A	S	I	F	R	V	K	E	G	D	P	N	L	G	V	I	A	E	T	L	T	E	H	G	T	R	Y	.	.	.	.	.	C	M	A	Q	N	Y	L	P	A	I	K	D	G	D	K	R	V	L	V	V	.	.	.	D	G	E	P	V	P	Y	C	L	A	R	I	P	Q	G	G	E
Query Conservation																																					.	.	.	.	.																					.	.	.
Alig confidence					.	.	.	.	.	.																											.	.	.	.	.											.										.	.	.
Template Conservation					.	.	.	.	.	.																																										.
Template Sequence		K	F	P	.	.	.	.	.	.	G	Y	F	I	A	S	S	T	E	E	F	Y	K	K	A	E	D	L	K	K	R	G	I	L	T	D	E	D	I	A	N	A	H	I	E	E	Y	V	V	G	T	.	N	F	C	I	H	Y	F	Y	S	P	L	K	D	E	V	E	L	L	G	M	D	K	R	Y	E	S	N	I	D
Template Known Secondary structure					.	.	.	.	.	.						S	S													T	T	T	S			T	T	T	G	G	G									S		.										T	T	T	T
Template Predicted Secondary structure					.	.	.	.	.	.																																										.
Template SS confidence
		156	.	.							.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.		200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.
																	232	.	.	.	.	.	.	.	240	.	.	.	.	.			.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.				.	.	.	.	270		.	.	.	.	.	.	.						.	.	280	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.															.	.																					.	.	.						.								.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.															.	.																					.	.	.						.								.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	R	G	N	L	A	A	G	G	R	G	E	P	R	.	.	P	L	T	E	S	D	W	K	I	A	R	Q	I	G	P	T	L	K	E	K	.	.	.	G	L	I	F	V	.	G	L	D	I	I	G	D	.	.	.	.	.	R	L	T	E	I	N	V	T
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.															.	.																					.	.	.						.								.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.															.	.																					.	.	.						.								.	.	.	.	.
Template Conservation
Template Sequence		G	L	V	R	I	P	A	K	D	Q	L	E	M	N	I	N	P	S	Y	V	I	T	G	N	I	P	V	V	I	R	E	S	L	L	P	Q	V	F	E	M	G	D	K	L	V	A	K	A	K	E	L	V	P	P	G	M	I	G	P	F	C	L	Q	S	L	C	N	E	N	L	E	L	V	V	F	E	M	S	A	R
Template Known Secondary structure				T	T	S							T	S																		G	G	G																			S	T	T														T	T	S									S	S
Template Predicted Secondary structure
Template SS confidence
		235	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.
		286	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	P	T	C
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	D	G	G
Template Known Secondary structure		B		G	G
Template Predicted Secondary structure
Template SS confidence
		315	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions