Job Description P04425 Confidence 99.85% Date Thu Jan 5 10:58:17 GMT 2012 Rank 53 Aligned Residues 279 % Identity 11% Template c2qk4A_ PDB info PDB header:ligase Chain: A: PDB Molecule:trifunctional purine biosynthetic protein adenosine-3; PDBTitle: human glycinamide ribonucleotide synthetase Resolution 2.45 Å

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		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30			.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
Predicted Secondary structure																														.	.
Query SS confidence																														.	.
Query Sequence		K	L	G	I	V	M	D	P	I	A	N	I	N	I	K	K	D	S	S	F	A	M	L	L	E	A	Q	R	.	.	R	G	Y	E	L	H	Y	M	E	M	G	D	L	Y	L	I	N	G	E	A	R	A	H	T	R	T	L	N	V	K	Q	N	Y	E	E	W	F	S	F	V	G	E	Q	D	L	P	L	A	D	L
Query Conservation																														.	.
Alig confidence								.	.	.	.	.	.	.	.															.	.																																									.	.	.	.	.	.	.	.
Template Conservation								.	.	.	.	.	.	.	.																																																									.	.	.	.	.	.	.	.
Template Sequence		R	V	L	I	I	G	.	.	.	.	.	.	.	.	S	G	G	R	E	H	T	L	A	W	K	L	A	Q	S	H	H	V	K	Q	V	L	V	A	P	G	N	A	G	T	A	C	S	E	K	I	S	N	T	A	I	S	I	S	D	H	T	A	L	A	Q	F	C	K	E	K	.	.	.	.	.	.	.	.	K	I
Template Known Secondary structure								.	.	.	.	.	.	.	.		S											T	T		T	T											G	G	G	S	B	S	S	S								S	S													.	.	.	.	.	.	.	.	T
Template Predicted Secondary structure								.	.	.	.	.	.	.	.																																																									.	.	.	.	.	.	.	.
Template SS confidence
		4	.	.	.	.	.									10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.									.	.
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.		.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.					.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.
Predicted Secondary structure																																			.																					.	.	.	.
Query SS confidence																																			.																					.	.	.	.
Query Sequence		D	V	I	L	M	R	K	D	P	P	F	D	T	E	F	I	Y	A	T	Y	I	L	E	R	A	E	E	K	G	T	L	I	V	.	N	K	P	Q	S	L	R	D	C	N	E	K	L	F	T	A	W	F	S	D	.	.	.	.	L	T	P	E	T	L	V	T	R	N	K	A	Q	L	K	A	F	W	E	K	H	S
Query Conservation																																			.																					.	.	.	.
Alig confidence							.	.	.	.	.	.																							.																					.	.	.	.
Template Conservation							.	.	.	.	.	.
Template Sequence		E	F	V	V	V	.	.	.	.	.	.	G	P	E	A	P	L	A	A	G	I	V	G	N	L	R	S	A	G	V	Q	C	F	G	P	T	A	E	A	A	Q	L	E	S	S	K	R	F	A	K	E	F	M	D	R	H	G	I	P	T	A	Q	W	K	A	F	T	K	P	E	E	A	C	S	F	I	L	S	A	D
Template Known Secondary structure							.	.	.	.	.	.		S	S					T	T								T	T					S			T	T	T	T					B											T	T			B							S	S												S
Template Predicted Secondary structure							.	.	.	.	.	.
Template SS confidence
		68	.	70	.	.							.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.
			156	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.				.	230	.
Predicted Secondary structure		.																																																																										.	.	.
Query SS confidence		.																																																																										.	.	.
Query Sequence		.	D	I	I	L	K	P	L	D	G	M	G	G	A	S	I	F	R	V	K	E	G	D	P	N	L	G	V	I	A	E	T	L	T	E	H	G	T	R	Y	C	M	A	Q	N	Y	L	P	A	I	K	D	G	D	K	R	V	L	V	V	D	G	E	P	V	P	Y	C	L	A	R	I	P	Q	.	.	.	G	G	E
Query Conservation		.																																																																										.	.	.
Alig confidence		.									.	.																								.	.	.											.																											.	.	.
Template Conservation											.	.																								.	.	.											.
Template Sequence		F	P	A	L	V	V	K	A	S	.	.	G	L	K	G	V	I	V	A	K	S	K	E	E	A	C	K	A	V	Q	E	I	M	Q	.	.	.	E	E	T	I	V	I	E	E	L	L	.	D	G	E	E	V	S	C	L	C	F	T	D	G	K	T	V	A	P	M	P	P	A	Q	D	H	K	R	L	L	E	G	D
Template Known Secondary structure		S								S	.	.	B								S	S												T	T	.	.	.											.		S											S	S								B								T	T	T
Template Predicted Secondary structure											.	.																								.	.	.											.
Template SS confidence
		142	.	.	.	.	.	.	.	150			.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.				.	.	.	.	.	.	180	.	.	.		.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.
		232	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.							.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.				270	.	.	.	.	.					.	.	.	.	280	.	.	.	.	.	.	.	.	.		290	.	.	.	.	.	.	.
Predicted Secondary structure																		.	.	.	.	.	.																							.	.	.							.	.	.	.															.
Query SS confidence																		.	.	.	.	.	.																							.	.	.							.	.	.	.															.
Query Sequence		T	R	G	N	L	A	A	G	G	R	G	E	P	R	P	L	.	.	.	.	.	.	T	E	S	D	W	K	I	A	R	Q	I	G	P	T	L	K	E	K	G	L	I	F	.	.	.	V	G	L	D	I	I	.	.	.	.	G	D	R	L	T	E	I	N	V	T	S	P	T	C	.	I	R	E	I	E	A	E	F
Query Conservation																		.	.	.	.	.	.																							.	.	.							.	.	.	.															.
Alig confidence																		.	.	.	.	.	.																							.	.	.							.	.	.	.															.
Template Conservation
Template Sequence		G	G	P	N	T	G	G	M	G	A	Y	C	P	A	P	Q	V	S	N	D	L	L	L	K	I	K	D	T	V	L	Q	R	T	V	D	G	M	Q	Q	E	G	T	P	Y	T	G	I	L	Y	A	G	I	M	L	T	K	N	G	P	K	V	L	E	F	N	C	R	F	G	D	P	E	C	Q	V	I	L	P	L	L
Template Known Secondary structure														S		T	T													T											T	T															T	T									S	S			T	T	T					G	G	G	B
Template Predicted Secondary structure
Template SS confidence
		226	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.
		298	.	300	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	V	S	I	T	G	M	L	M	D	A	I
Query Conservation
Alig confidence
Template Conservation
Template Sequence		K	S	D	L	Y	E	V	I	Q	S	T	L
Template Known Secondary structure			S
Template Predicted Secondary structure
Template SS confidence
		306	.	.	.	310	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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