Job Description P04425 Confidence 99.86% Date Thu Jan 5 10:58:17 GMT 2012 Rank 50 Aligned Residues 287 % Identity 12% Template c2gpwC_ PDB info PDB header:ligase Chain: C: PDB Molecule:biotin carboxylase; PDBTitle: crystal structure of the biotin carboxylase subunit, f363a2 mutant, of acetyl-coa carboxylase from escherichia coli. Resolution 2.20 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.			.
Predicted Secondary structure																																																																															.	.
Query SS confidence																																																																															.	.
Query Sequence		M	I	K	L	G	I	V	M	D	P	I	A	N	I	N	I	K	K	D	S	S	F	A	M	L	L	E	A	Q	R	R	G	Y	E	L	H	Y	M	E	M	G	D	L	Y	L	I	N	G	E	A	R	A	H	T	R	T	L	N	V	K	Q	N	Y	E	E	W	F	S	F	V	G	E	Q	D	L	P	L	.	.	A
Query Conservation																																																																															.	.
Alig confidence											.	.	.	.	.	.	.																																																														.	.
Template Conservation											.	.	.	.	.	.	.
Template Sequence		M	L	D	K	I	V	I	A	N	.	.	.	.	.	.	.	R	G	E	I	A	L	R	I	L	R	A	C	K	E	L	G	I	K	T	V	A	V	H	S	S	A	D	R	D	L	K	H	V	L	L	A	D	E	T	V	C	I	G	P	A	P	S	V	K	S	Y	L	N	I	P	A	I	I	S	A	A	E	I	T
Template Known Secondary structure		S	S								.	.	.	.	.	.	.															T	T									G	G	G	T	T							S	S						S	S	S	S	G	G	G	T	T	T
Template Predicted Secondary structure											.	.	.	.	.	.	.
Template SS confidence
		1	.	.	.	.	.	.	.	.								10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.
		79	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.		.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.					.	.	.	.	.	.	140	.				.	.	.	.	.	.	.	.	150
Predicted Secondary structure																																							.																			.	.	.	.									.	.	.
Query SS confidence																																							.																			.	.	.	.									.	.	.
Query Sequence		D	L	D	V	I	L	M	R	K	D	P	P	F	D	T	E	F	I	Y	A	T	Y	I	L	E	R	A	E	E	K	G	T	L	I	V	N	K	.	P	Q	S	L	R	D	C	N	E	K	L	F	T	A	W	F	S	D	.	.	.	.	L	T	P	E	T	L	V	T	.	.	.	R	N	K	A	Q	L	K	A	F
Query Conservation																																							.																			.	.	.	.									.	.	.
Alig confidence								.	.	.	.	.																											.																			.	.	.	.									.	.	.
Template Conservation								.	.	.	.	.
Template Sequence		G	A	V	A	I	H	.	.	.	.	.	P	G	Y	G	F	L	S	E	N	A	N	F	A	E	Q	V	E	R	S	G	F	I	F	I	G	P	K	A	E	T	I	R	L	M	G	D	K	V	S	A	I	A	A	M	K	K	A	G	V	P	C	V	P	G	S	D	G	P	L	G	D	D	M	D	K	N	R	A	I
Template Known Secondary structure		T						.	.	.	.	.			S	S	T	T	T	T											T	T				S	S	S										S												T			B			B		S	S				S
Template Predicted Secondary structure								.	.	.	.	.
Template SS confidence
		74	.	.	.	.	.						80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.
		151	.	.	.	.		.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.					.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.
Predicted Secondary structure							.																																	.	.	.	.
Query SS confidence							.																																	.	.	.	.
Query Sequence		W	E	K	H	S	.	D	I	I	L	K	P	L	D	G	M	G	G	A	S	I	F	R	V	K	E	G	D	P	N	L	G	V	I	A	E	T	L	.	.	.	.	T	E	H	G	T	R	Y	C	M	A	Q	N	Y	L	P	A	I	K	D	G	D	K	R	V	L	V	V	D	G	E	P	V	P	Y	C	L	A	R
Query Conservation							.																																	.	.	.	.
Alig confidence							.							.	.	.	.	.																						.	.	.	.
Template Conservation														.	.	.	.	.
Template Sequence		A	K	R	I	G	Y	P	V	I	I	K	A	.	.	.	.	.	S	G	G	M	R	V	V	R	G	D	A	E	L	A	Q	S	I	S	M	T	R	A	E	A	K	A	A	F	S	N	D	M	V	Y	M	E	K	Y	L	E	N	P	R	H	V	E	I	Q	V	L	A	D	G	Q	G	N	A	I	Y	L	A	E	R
Template Known Secondary structure							S	S						.	.	.	.	.									S	G	G	G																	S												S												S	S	S
Template Predicted Secondary structure														.	.	.	.	.
Template SS confidence
		149	150	.	.	.	.	.	.	.	.	.	160						.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.
		226	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.					250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.					.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.
Predicted Secondary structure																										.	.	.	.																											.	.	.	.
Query SS confidence																										.	.	.	.																											.	.	.	.
Query Sequence		I	P	Q	G	G	E	T	R	G	N	L	A	A	G	G	R	G	E	P	R	P	L	T	E	.	.	.	.	S	D	W	K	I	A	R	Q	I	G	P	T	L	K	E	K	G	L	I	F	V	G	L	D	I	I	.	.	.	.	G	D	R	L	T	E	I	N	V	T	S	P	T	C	I	R	E	I	E	A	E	F
Query Conservation																										.	.	.	.																											.	.	.	.
Alig confidence							.	.																		.	.	.	.																				.	.						.	.	.	.
Template Conservation							.	.																																									.	.
Template Sequence		D	C	S	M	Q	.	.	R	R	H	Q	K	V	V	E	E	A	P	A	P	G	I	T	P	E	L	R	R	Y	I	G	E	R	C	A	K	A	C	V	D	I	G	Y	R	G	A	G	.	.	T	F	E	F	L	F	E	N	G	E	F	Y	F	I	E	M	N	T	R	I	Q	V	E	H	P	V	T	E	M	I	T
Template Known Secondary structure							.	.		T	T								S		T	T																					T						.	.								T	T									S	S			T	T
Template Predicted Secondary structure							.	.																																									.	.
Template SS confidence
		229	230	.	.	.			.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.			.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.
		298	.	300	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	V	S	I	T	G	M	L	M	D	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		G	V	D	L	I	K	E	Q	L	R	I
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		305	.	.	.	.	310	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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