Job Description P04425 Confidence 99.86% Date Thu Jan 5 10:58:17 GMT 2012 Rank 51 Aligned Residues 272 % Identity 14% Template c2dwcB_ PDB info PDB header:transferase Chain: B: PDB Molecule:433aa long hypothetical phosphoribosylglycinamide formyl PDBTitle: crystal structure of probable phosphoribosylglycinamide formyl2 transferase from pyrococcus horikoshii ot3 complexed with adp Resolution 1.70 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	L	G	I	V	M	D	P	I	A	N	I	N	I	K	K	D	S	S	F	A	M	L	L	E	A	Q	R	R	G	Y	E	L	H	Y	M	E	M	G	D	L	Y	L	I	N	G	E	A	R	A	H	T	R	T	L	N	V	K	Q	N	Y	E	E	W	F	S	F	V	G	E	Q	D	L	P	L	A	D	L	D	V
Query Conservation
Alig confidence								.	.	.	.	.	.	.	.																										.	.																																.	.	.	.	.
Template Conservation								.	.	.	.	.	.	.	.																										.	.																																.	.	.	.	.
Template Sequence		K	I	L	L	L	G	.	.	.	.	.	.	.	.	S	G	E	L	G	K	E	I	A	I	E	A	Q	R	L	G	V	E	V	V	A	V	D	R	Y	.	.	A	N	A	P	A	M	Q	V	A	H	R	S	Y	V	G	N	M	M	D	K	D	F	L	W	S	V	V	E	R	E	K	.	.	.	.	.	P	D	A
Template Known Secondary structure							S	.	.	.	.	.	.	.	.		S													T	T								S	S	.	.	T	T							S	S					S		T	T														.	.	.	.	.		S
Template Predicted Secondary structure								.	.	.	.	.	.	.	.																										.	.																																.	.	.	.	.
Template SS confidence
		21	.	.	.	.	.									.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.			.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.						.	.	.
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.						.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.		.
Predicted Secondary structure																																																					.	.	.	.	.																							.
Query SS confidence																																																					.	.	.	.	.																							.
Query Sequence		I	L	M	R	K	D	P	P	F	D	T	E	F	I	Y	A	T	Y	I	L	E	R	A	E	E	K	G	T	L	I	V	N	K	P	Q	S	L	R	D	C	N	E	K	L	F	T	A	W	F	S	D	.	.	.	.	.	L	T	P	E	T	L	V	T	R	N	K	A	Q	L	K	A	F	W	E	K	H	S	.	D
Query Conservation																																																					.	.	.	.	.																							.
Alig confidence											.	.	.	.	.	.	.																																				.	.	.	.	.																							.
Template Conservation											.	.	.	.	.	.	.
Template Sequence		I	I	P	E	I	E	A	I	N	.	.	.	.	.	.	.	L	D	A	L	F	E	F	E	K	D	G	Y	F	V	V	P	N	A	R	A	T	W	I	A	M	H	R	E	R	L	R	E	T	L	V	K	E	A	K	V	P	T	S	R	Y	M	Y	A	T	T	L	D	E	L	Y	E	A	C	E	K	I	G	Y	P
Template Known Secondary structure						S	S		S		.	.	.	.	.	.	.										T	T			B	S	S									T	S											T	T											S	S													S	S
Template Predicted Secondary structure											.	.	.	.	.	.	.
Template SS confidence
		86	.	.	.	90	.	.	.	.								.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.
		157	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	I	L	K	P	L	D	G	M	G	G	A	S	I	F	R	V	K	E	G	D	P	N	L	G	V	I	A	E	T	L	T	E	H	G	T	R	Y	C	M	A	Q	N	Y	L	P	A	I	K	D	G	D	K	R	V	L	V	V	D	G	E	P	V	P	Y	C	L	A	R	I	P	Q	G	G	E	T	R	G	N	L
Query Conservation
Alig confidence							.	.	.	.																			.	.	.	.	.	.	.
Template Conservation							.	.	.	.																			.	.	.	.	.	.	.
Template Sequence		C	H	T	K	A	.	.	.	.	I	M	S	G	S	Y	F	V	K	G	P	E	D	I	P	K	A	W	.	.	.	.	.	.	.	E	E	E	K	I	I	V	E	E	H	I	D	F	D	V	E	V	T	E	L	A	V	R	H	F	D	E	N	G	E	I	V	T	T	F	P	K	P	V	G	H	Y	Q	I	D	G
Template Known Secondary structure							.	.	.	.	S									S	G	G	G						.	.	.	.	.	.	.	T													S													T	T	S																T	T
Template Predicted Secondary structure							.	.	.	.																			.	.	.	.	.	.	.
Template SS confidence
		159	160	.	.	.					.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.								.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.
		237	.	.	240	.	.	.	.	.	.	.	.	.	250					.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.					.	.	.	.	280	.	.	.	.	.	.	.	.	.			290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.
Predicted Secondary structure																.	.	.	.																										.	.	.	.															.	.
Query SS confidence																.	.	.	.																										.	.	.	.															.	.
Query Sequence		A	A	G	G	R	G	E	P	R	P	L	T	E	S	.	.	.	.	D	W	K	I	A	R	Q	I	G	P	T	L	K	E	K	G	L	I	F	V	G	L	D	I	I	.	.	.	.	G	D	R	L	T	E	I	N	V	T	S	P	T	C	.	.	I	R	E	I	E	A	E	F	P	V	S	I	T	G	M	L	M
Query Conservation																.	.	.	.																										.	.	.	.															.	.
Alig confidence																.	.	.	.																			.	.						.	.	.	.															.	.
Template Conservation																																						.	.
Template Sequence		D	Y	H	A	S	W	Q	P	A	E	I	S	E	K	A	E	R	E	V	Y	R	I	A	K	R	I	T	D	V	L	G	G	L	G	I	F	.	.	G	V	E	M	F	V	K	G	D	K	V	W	A	N	E	V	S	P	R	P	H	D	T	G	M	V	T	L	A	S	H	P	P	G	F	S	E	F	A	L	H	L
Template Known Secondary structure									S																								S	S				.	.								T	T									S	S			G	G	G	G	G					S		T	T		S
Template Predicted Secondary structure																																						.	.
Template SS confidence
		241	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.			.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.
		307	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	A	I
Query Conservation
Alig confidence
Template Conservation
Template Sequence		R	A	V
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		319	320	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions