Return to main results Retrieve Phyre Job Id

Job DescriptionP04425
Confidence97.83%DateThu Jan 5 10:58:17 GMT 2012
Rank79Aligned Residues113
% Identity12%Templatec1wr2A_
PDB info PDB header:structural genomics, unknown functionChain: A: PDB Molecule:hypothetical protein ph1789; PDBTitle: crystal structure of ph1788 from pyrococcus horikoshii ot3
Resolution2.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   98.100.........110.........120.........130.........140.........150..... ....160........ .170.
Predicted Secondary structure 















.









.....
Query SS confidence 

























































.












. . . . .


Query Sequence  ATYILERAEEKGTLIVNKPQSLRDCNEKLFTAWFSDLTPETLVTRNKAQLKAFWEKHS. DIILKPLDGMGGA. . . . . SIF
Query Conservation      
      
    
          
     
    
 
                 .  



  
  
 .....

 
Alig confidence 

























......

























.












.....


Template Conservation 
   
  

      
 
 


 

 ......  




         

   
  

 




        
   


 
Template Sequence  AVRVIEEVLKQGRTAMVEYEAKQVLK. . . . . . AYGLPVPEEKLAKTLDEALEYAKEIGYPVVLKLMSPQILHKSDAKVVM
Template Known Secondary structure  TT


......TTT





SS
SS
TT


T
Template Predicted Secondary structure 






......























Template SS confidence 















































































   5....10.........20.........30 .........40.........50.........60.........70........
 
   172 .......180.........190 .........200.........210......
Predicted Secondary structure  .


.......










Query SS confidence 
.

















. . . . . . .

























Query Sequence  R. VKEGDPNLGVIAETLTEH. . . . . . . GTRYCMAQNYLPAIKDGDKRVLVVDG
Query Conservation   .
           
     .......     



 
      
 

     
Alig confidence 
.

















.......

























Template Conservation 
 
        
   
               



       
  
 
  
  
Template Sequence  LNIKNEEELKKKWEEIHENAKKYRPDAEILGVLVAPMLKPGREVIIGVTEDPQ
Template Known Secondary structure 
S
TT








TT
Template Predicted Secondary structure 



















Template SS confidence 




















































   7980.........90.........100.........110.........120.........130.
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions