Job Description P04425 Confidence 99.94% Date Thu Jan 5 10:58:17 GMT 2012 Rank 14 Aligned Residues 292 % Identity 12% Template c1w96B_ PDB info PDB header:ligase Chain: B: PDB Molecule:acetyl-coenzyme a carboxylase; PDBTitle: crystal structure of biotin carboxylase domain of acetyl-2 coenzyme a carboxylase from saccharomyces cerevisiae in3 complex with soraphen a Resolution 1.8 Å

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		10	.	.	.	.	.	.	.	.	.	20	.	.	.			.	.	.	.	.	.	30	.	.	.	.													.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.
Predicted Secondary structure																.	.												.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																.	.												.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		P	I	A	N	I	N	I	K	K	D	S	S	F	A	.	.	M	L	L	E	A	Q	R	R	G	Y	E	.	.	.	.	.	.	.	.	.	.	.	.	L	H	Y	M	E	M	G	D	L	Y	L	I	N	G	E	A	R	A	H	T	R	T	L	N	V	K	Q	N	Y	E	E	W	F	S	F	V	G	E	Q	D	L
Query Conservation																.	.												.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																.	.												.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		V	I	S	K	I	L	I	A	N	N	G	I	A	A	V	K	E	I	R	S	V	R	K	W	A	Y	E	T	F	G	D	D	R	T	V	Q	F	V	A	M	A	T	P	E	D	L	E	A	N	A	E	Y	I	R	M	A	D	Q	Y	I	E	V	P	G	G	T	N	N	N	N	Y	A	N	V	D	L	I	V	D	I
Template Known Secondary structure																															S		T	T	S	S													T	T							S	S								S	S	G	G	G	T	T	T
Template Predicted Secondary structure
Template SS confidence
		58	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.
			76	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.			.	110	.	.	.	.	.		.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.					.	.	.	.	.	.
Predicted Secondary structure		.																																		.	.								.																			.	.	.	.							.	.	.	.	.	.	.	.
Query SS confidence		.																																		.	.								.																			.	.	.	.							.	.	.	.	.	.	.	.
Query Sequence		.	P	L	A	D	L	D	V	I	L	M	R	K	D	P	P	F	D	T	E	F	I	Y	A	T	Y	I	L	E	R	A	E	E	K	.	.	G	T	L	I	V	N	K	.	P	Q	S	L	R	D	C	N	E	K	L	F	T	A	W	F	S	D	.	.	.	.	L	T	P	E	T	L	.	.	.	.	.	.	.	.
Query Conservation		.																																		.	.								.																			.	.	.	.							.	.	.	.	.	.	.	.
Alig confidence		.																				.	.	.	.	.										.	.								.																			.	.	.	.							.	.	.	.	.	.	.	.
Template Conservation																						.	.	.	.	.
Template Sequence		A	E	R	A	D	V	D	A	V	W	A	G	W	G	H	A	S	E	N	P	.	.	.	.	.	L	L	P	E	K	L	S	Q	S	K	R	K	V	I	F	I	G	P	P	G	N	A	M	R	S	L	G	D	K	I	S	S	T	I	V	A	Q	S	A	K	V	P	C	I	P	W	S	G	T	G	V	D	T	V	H
Template Known Secondary structure					T	T		S						S	S	T	T	T	T		T	.	.	.	.	.									S	T	T					S	S									S		S											T	T			B			B	T	T	T	T
Template Predicted Secondary structure																						.	.	.	.	.
Template SS confidence
		138	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.						.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.
																				140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.		.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	T	R	N	K	A	Q	L	K	A	F	W	E	K	H	S	.	D	I	I	L	K	P	L	D	G	M	G	G	A	S	I	F	R	V	K	E	G	D	P	N	L	G	V	I	A	E	T	L	T	E	H	G	T	R	Y	C	M	A	Q	N	Y
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.
Template Conservation
Template Sequence		V	D	E	K	T	G	L	V	S	V	D	D	D	I	Y	Q	K	G	C	C	T	S	P	E	D	G	L	Q	K	A	K	R	I	G	F	P	V	M	I	K	A	S	E	G	G	G	G	K	G	I	R	Q	V	E	R	E	E	D	F	I	A	L	Y	H	Q	A	A	N	E	I	P	G	S	P	I	F	I	M	K	L
Template Known Secondary structure				T	T	T											G	G	G	S		S	S													S	S						T	T			S	S	T	T					S	S	G	G	G												S	T	T
Template Predicted Secondary structure
Template SS confidence
		213	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.
		201	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.		.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.		.	.	.	.	.	.
Predicted Secondary structure																																																						.																				.							.
Query SS confidence																																																						.																				.							.
Query Sequence		L	P	A	I	K	D	G	D	K	R	V	L	V	V	D	G	E	P	V	P	Y	C	L	A	R	I	P	Q	G	G	E	T	R	G	N	L	A	A	G	G	R	G	E	P	R	P	L	T	E	S	D	W	.	K	I	A	R	Q	I	G	P	T	L	K	E	K	G	L	I	F	V	G	.	L	D	I	I	G	D	.
Query Conservation																																																						.																				.							.
Alig confidence																																.	.																					.																				.							.
Template Conservation																																.	.
Template Sequence		A	G	R	A	R	H	L	E	V	Q	L	L	A	D	Q	Y	G	T	N	I	S	L	F	G	R	D	C	S	V	Q	.	.	R	R	H	Q	K	I	I	E	E	A	P	V	T	I	A	K	A	E	T	F	H	E	M	E	K	A	A	V	R	L	G	K	L	V	G	Y	V	S	A	G	T	V	E	Y	L	Y	S	H
Template Known Secondary structure				S												T	T	S														.	.		T	T								S			S	S																				T													T
Template Predicted Secondary structure																																.	.
Template SS confidence
		293	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.			.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370
							278	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.
Query SS confidence		.	.	.	.	.
Query Sequence		.	.	.	.	.	R	L	T	E	I	N	V	T	S	P	T	C	I	R	E	I	E	A	E	F	P	V	S	I	T	G	M	L	M	D	A
Query Conservation		.	.	.	.	.
Alig confidence		.	.	.	.	.
Template Conservation
Template Sequence		D	D	G	K	F	Y	F	L	E	L	N	P	R	L	Q	V	E	H	P	T	T	E	M	V	S	G	V	N	L	P	A	A	Q	L	Q	I
Template Known Secondary structure		T	T	T										S			T	T	T
Template Predicted Secondary structure
Template SS confidence
		371	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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