Job Description P04425 Confidence 26.32% Date Thu Jan 5 10:58:17 GMT 2012 Rank 205 Aligned Residues 81 % Identity 17% Template c1ml4A_ PDB info PDB header:transferase Chain: A: PDB Molecule:aspartate transcarbamoylase; PDBTitle: the pala-liganded aspartate transcarbamoylase catalytic subunit from2 pyrococcus abyssi Resolution 1.80 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.		.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
Predicted Secondary structure																																			.
Query SS confidence																																			.
Query Sequence		K	L	G	I	V	M	D	P	I	A	N	I	N	I	K	K	D	S	S	F	A	M	L	L	E	A	Q	R	R	G	Y	E	L	.	H	Y	M	E	M	G	D	L	Y	L	I	N	G	E	A	R	A	H	T	R	T	L	N	V	K	Q	N	Y	E	E	W	F	S	F	V	G	E	Q	D	L	P	L	A	D	L	D
Query Conservation																																			.
Alig confidence								.	.	.	.	.																							.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation								.	.	.	.	.																																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		I	L	A	T	L	F	.	.	.	.	.	F	E	P	S	T	R	T	R	L	S	F	E	S	A	M	H	R	L	G	G	A	V	I	G	F	A	E	A	S	T	S	S	V	K	K	G	E	S	L	R	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	T	I	K	T	V	E	Q	Y	C	D
Template Known Secondary structure								.	.	.	.	.	S	S			S													T	T							S		G	G	G	S	G	G	G	G	T					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.							T	T	T		S
Template Predicted Secondary structure								.	.	.	.	.																																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		46	.	.	.	50	.						.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.																			.	.	.	.	.	.	.	.	100	.	.
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	I	L	M	R	K	D	P	P	F	D	T	E	F	I	Y	A	T	Y	I	L	E	R	A	E	E	K	G	T	L	I	V	N
Query Conservation
Alig confidence												.	.	.	.	.	.	.	.
Template Conservation												.	.	.	.	.	.	.	.
Template Sequence		V	I	V	I	R	H	P	K	E	G	.	.	.	.	.	.	.	.	A	A	R	L	A	A	E	V	A	E	V	P	V	I	N
Template Known Secondary structure								S	S	T	T	.	.	.	.	.	.	.	.								T		S	S
Template Predicted Secondary structure												.	.	.	.	.	.	.	.
Template SS confidence
		103	.	.	.	.	.	.	110	.	.									.	.	.	.	.	.	.	120	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions