Job Description P0AEE5 Confidence 97.89% Date Thu Jan 5 11:23:08 GMT 2012 Rank 87 Aligned Residues 222 % Identity 7% Template d1qo0a_ SCOP info Periplasmic binding protein-like I Periplasmic binding protein-like I L-arabinose binding protein-like Resolution 2.25

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		25	.	.	.	.	30	.	.	.	.	.	.	.			.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.										.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.
Predicted Secondary structure															.	.																	.	.	.	.	.	.	.	.	.
Query SS confidence															.	.																	.	.	.	.	.	.	.	.	.
Query Sequence		D	T	R	I	G	V	T	I	Y	K	Y	D	D	.	.	N	F	M	S	V	V	R	K	A	I	E	Q	D	A	K	A	.	.	.	.	.	.	.	.	.	A	P	D	V	Q	L	L	M	N	D	S	Q	N	D	Q	S	K	Q	N	D	Q	I	D	V	L	L	A	K	G	V	K	A	L	A	I	N	L	V	D	P
Query Conservation															.	.																	.	.	.	.	.	.	.	.	.
Alig confidence															.	.																	.	.	.	.	.	.	.	.	.		.
Template Conservation																																											.
Template Sequence		R	P	L	I	G	L	L	F	S	E	T	G	V	T	A	D	I	E	R	S	Q	R	Y	G	A	L	L	A	V	E	Q	L	N	R	E	G	G	V	G	G	R	.	P	I	E	T	L	S	Q	D	P	G	G	D	P	D	R	Y	R	L	C	A	E	D	F	I	R	N	R	G	V	R	F	L	V	G	C	Y	M	S
Template Known Secondary structure											S	S	S	T	T																					T	T		B	T	T	B	.										T	T																S										S
Template Predicted Secondary structure																																											.
Template SS confidence
		7	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.		.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.
		94	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	A	A	G	T	V	I	E	K	A	R	G	Q	N	V	P	V	V	F	F	N	K	E	P	S	R	K	A	L	D	S	Y	D	K	A	Y	Y	V	G	T	D	S	K	E	S	G	I	I	Q	G	D	L	I	A	K	H	W	A	A	N	Q	G	W	D	L	N	K	D	G	Q	I	Q	F	V	L	L	K	G	E	P
Query Conservation
Alig confidence																				.	.	.																																							.	.	.	.	.	.	.	.	.	.	.	.									.
Template Conservation																				.	.	.																																							.	.	.	.	.	.	.	.	.	.	.	.									.
Template Sequence		H	T	R	K	A	V	M	P	V	V	E	R	A	D	A	L	L	C	.	.	.	Y	P	T	P	Y	E	G	F	E	Y	S	P	N	I	V	Y	G	G	P	A	P	N	Q	N	S	A	P	L	A	A	Y	L	I	R	H	Y	G	E	.	.	.	.	.	.	.	.	.	.	.	.	R	V	V	F	I	G	S	D	.
Template Known Secondary structure															T					.	.	.			S									T	T					S			G	G	G	T												S		S	.	.	.	.	.	.	.	.	.	.	.	.								S	.
Template Predicted Secondary structure																				.	.	.																																							.	.	.	.	.	.	.	.	.	.	.	.									.
Template SS confidence
		86	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.				.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.													.	.	.	.	.	.	.	.
		174	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	H	P	D	A	E	A	R	T	T	Y	V	I	K	E	L	N	D	K	G	I	K	T	E	Q	L	Q	L	D	T	A	M	W	D	T	A	Q	A	K	D	K	M	D	A	W	L	S	G	P	N	A	N	K	I	E	V	V	I	A	N	N	D	A	M	A	M	G	A	V	E	A	L	K	A	H	N	K	S	S	I
Query Conservation
Alig confidence		.																																																																										.
Template Conservation		.																																																																										.
Template Sequence		.	Y	I	Y	P	R	E	S	N	H	V	M	R	H	L	Y	R	Q	H	G	G	T	V	L	E	E	I	Y	I	P	L	Y	P	S	D	D	D	L	Q	R	A	V	E	R	I	Y	Q	A	R	A	D	V	V	F	S	T	V	V	G	T	G	T	A	E	L	Y	R	A	I	A	R	R	Y	G	.	D	G	R	R	P
Template Known Secondary structure		.	S																T	T	T											S	S																	T		S								S	T	T														.	S	S
Template Predicted Secondary structure		.																																																																										.
Template SS confidence
			150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.		.	.	.	.	.
		254	.	.	.	.	.	260	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	V	F	G	V	D	A	L	P	E	A	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		P	I	A	S	L	T	T	S	E	A	E	V
Template Known Secondary structure						S	S
Template Predicted Secondary structure
Template SS confidence
		228	.	230	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions