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Job DescriptionP0AEE5
Confidence98.49%DateThu Jan 5 11:23:08 GMT 2012
Rank73Aligned Residues223
% Identity16%Templatec3sg0A_
PDB info PDB header:signaling proteinChain: A: PDB Molecule:extracellular ligand-binding receptor; PDBTitle: the crystal structure of an extracellular ligand-binding receptor from2 rhodopseudomonas palustris haa2
Resolution1.20 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   23......30.........40. ........50...... ...60.........70.........80.........90.......
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Query Sequence  AADTRIGVTIYKYDDNFMS. . . VVRKAIEQDAKAAPD. . VQLLMNDSQNDQSKQNDQIDVLLAKGVKALAINLVDPAAAG
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Template Sequence  QAEIKIGITXS. ASGPGAALGQPQSKTVAALPKEIGGEKVTYFALDDESDPTKAAQNARKLLSEEKVDVLIGSSLTPVSL
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SSTTGGGS
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   22.......30.. .......40.........50.........60.........70.........80.........90.........100
 
   98.100.........110.........120. ........130.........140.........150.........160.........170.....
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Query Sequence  TVIEKARGQNVPVVFFNKEPSRKA. . LDSYDKAYYVGTDSKESGIIQGDLIAKHWAANQGWDLNKDGQIQFVLLKGEPGH
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Template Sequence  PLIDIAAEAKTPLXTXAAAAILVAPXDERRKWVYKVVPNDDIXAEAIGKYIAKTGAK. . . . . . . . . . . . KVGYIGF. . SD
Template Known Secondary structure  TT





GGGT
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TTGGG
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   101........110.........120.........130.........140.........150....... ..160.... ..
 
   176...180.........190.........200.........210.........220.........230.........240.........250.....
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Query Sequence  PDAEARTTYVIKELNDKGIKTEQLQLDTAMWDTAQAKDKMDAWLSGPNANKIEVVIANNDAMAMGAVEALKAHNKSSIPV
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Template Sequence  AYGEGYYKVLAAAAPKLGFELTTHEVYARSDAS. . . . . VTGQVLKIIATKPDAVFIASAGTPAVLPQKALRERGFKGAIY
Template Known Secondary structure  T




TT
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   167..170.........180.........190......... 200.........210.........220.........230.........240.
 
   256...260.....
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Query Sequence  FGVDALPEAL
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Template Sequence  QTHGVATEEF
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   242.......250.
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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