Job Description P0AEE5 Confidence 98.24% Date Thu Jan 5 11:23:08 GMT 2012 Rank 79 Aligned Residues 230 % Identity 11% Template c3i45A_ PDB info PDB header:signaling protein Chain: A: PDB Molecule:twin-arginine translocation pathway signal protein; PDBTitle: crystal structure of putative twin-arginine translocation pathway2 signal protein from rhodospirillum rubrum atcc 11170 Resolution 1.36 Å

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		22	.	.	.	.	.	.	.	30	.	.	.		.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.				.	.							.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.
Predicted Secondary structure														.																						.	.	.			.	.	.	.	.	.
Query SS confidence														.																						.	.	.			.	.	.	.	.	.
Query Sequence		H	A	A	D	T	R	I	G	V	T	I	Y	.	K	Y	D	D	N	F	M	S	V	V	R	K	A	I	E	Q	D	A	K	A	A	.	.	.	P	D	.	.	.	.	.	.	V	Q	L	L	M	N	D	S	Q	N	D	Q	S	K	Q	N	D	Q	I	D	V	L	L	A	K	G	V	K	A	L	A	I	N	L	V
Query Conservation														.																						.	.	.			.	.	.	.	.	.
Alig confidence														.																						.	.	.			.	.	.	.	.	.
Template Conservation
Template Sequence		S	L	E	A	I	R	I	G	E	I	N	S	Y	S	Q	I	P	A	F	T	L	P	Y	R	N	G	W	Q	L	A	V	E	Q	I	N	A	A	G	G	L	L	G	G	R	P	L	E	V	I	S	R	D	D	G	G	D	P	G	K	A	V	T	A	A	Q	E	L	L	T	R	H	G	V	H	A	L	A	G	T	F
Template Known Secondary structure														T	T	T																						T	T		B	T	T	T	B										T	T																			S
Template Predicted Secondary structure
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
		92	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	P	A	A	A	G	T	V	I	E	K	A	R	G	Q	N	V	P	V	V	F	F	N	K	E	P	S	R	K	A	L	D	S	Y	D	K	A	Y	Y	V	G	T	D	S	K	E	S	G	I	I	Q	G	D	L	I	A	K	H	W	A	A	N	Q	G	W	D	L	N	K	D	G	Q	I	Q	F	V	L	L	K	G
Query Conservation
Alig confidence																																																																.	.	.	.	.	.	.	.	.	.	.							.
Template Conservation																																																																.	.	.	.	.	.	.	.	.	.	.							.
Template Sequence		L	S	H	V	G	L	A	V	S	D	F	A	R	Q	R	K	V	L	F	M	A	S	E	P	L	T	D	A	L	T	W	E	K	G	N	R	Y	T	Y	R	L	R	P	S	T	Y	M	Q	A	A	M	L	A	A	E	A	A	K	L	P	I	T	.	.	.	.	.	.	.	.	.	.	.	R	W	A	T	I	A	.
Template Known Secondary structure		S															T							S				G	G	G	T	T	T	T			T	T					S															T	T	S	S			.	.	.	.	.	.	.	.	.	.	.							.
Template Predicted Secondary structure																																																																.	.	.	.	.	.	.	.	.	.	.							.
Template SS confidence
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.												.	.	.	.	.	.
		172	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	P	G	H	P	D	A	E	A	R	T	T	Y	V	I	K	E	L	N	D	K	G	I	K	T	E	Q	L	Q	L	D	T	A	M	W	D	T	A	Q	A	K	D	K	M	D	A	W	L	S	G	P	N	A	N	K	I	E	V	V	I	A	N	N	D	A	M	A	M	G	A	V	E	A	L	K	A	H	N	K	S
Query Conservation
Alig confidence		.
Template Conservation		.
Template Sequence		.	P	N	Y	E	Y	G	Q	S	A	V	A	R	F	K	E	L	L	L	A	A	R	P	E	V	T	F	V	A	E	Q	W	P	A	L	Y	K	L	D	A	G	P	T	V	Q	A	L	Q	Q	A	E	P	E	G	L	F	N	V	L	F	G	A	D	L	P	K	F	V	R	E	G	R	V	R	G	L	F	A	G	R
Template Known Secondary structure		.		S	S																			T	T											T	T														T			S								T	T													T	S	S	T	T
Template Predicted Secondary structure		.
Template SS confidence
			150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.
		252	.	.	.	.	.	.	.	260	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	I	P	V	F	G	V	D	A	L	P	E	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		Q	V	V	S	M	L	T	G	E	P	E	Y	L
Template Known Secondary structure										S
Template Predicted Secondary structure
Template SS confidence
		229	230	.	.	.	.	.	.	.	.	.	240	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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