Email l.a.kelley@imperial.ac.uk Description P0A898 Date Thu Jan 5 11:07:15 GMT 2012 Unique Job ID 25c9c37d104f1fa0

Detailed template information

# Template Alignment Coverage 3D Model Confidence % i.d. Template Information

1 d1xm5a_ 100.0 100 Fold:Zincin-like Superfamily:Metalloproteases ("zincins"), catalytic domain Family:Predicted metal-dependent hydrolase 2 c1xaxA_ 100.0 69 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:hypothetical upf0054 protein hi0004; PDBTitle: nmr structure of hi0004, a putative essential gene product2 from haemophilus influenzae 3 d1oz9a_ 100.0 33 Fold:Zincin-like Superfamily:Metalloproteases ("zincins"), catalytic domain Family:Predicted metal-dependent hydrolase 4 d1tvia_ 100.0 28 Fold:Zincin-like Superfamily:Metalloproteases ("zincins"), catalytic domain Family:Predicted metal-dependent hydrolase 5 d1xfia_ 65.4 12 Fold:AF1104-like Superfamily:AF1104-like Family:AF1104-like 6 d1lmla_ 65.0 19 Fold:Zincin-like Superfamily:Metalloproteases ("zincins"), catalytic domain Family:Leishmanolysin 7 c2xhqA_ 59.4 29 PDB header:hydrolase Chain: A: PDB Molecule:archaemetzincin; PDBTitle: crystal structure of archaemetzincin (amza) from archaeoglobus2 fulgidus at 1.45 a resolution 8 c2x7mA_ 55.0 19 PDB header:hydrolase Chain: A: PDB Molecule:archaemetzincin; PDBTitle: crystal structure of archaemetzincin (amza) from methanopyrus2 kandleri at 1.5 a resolution 9 d1k7ia2 50.3 11 Fold:Zincin-like Superfamily:Metalloproteases ("zincins"), catalytic domain Family:Serralysin-like metalloprotease, catalytic (N-terminal) domain 10 c1u9pA_ 49.2 15 PDB header:unknown function Chain: A: PDB Molecule:parc; PDBTitle: permuted single-chain arc 11 c1qysA_ 45.2 33 PDB header:de novo protein Chain: A: PDB Molecule:top7; PDBTitle: crystal structure of top7: a computationally designed2 protein with a novel fold 12 d1wgna_ 44.5 15 Fold:RuvA C-terminal domain-like Superfamily:UBA-like Family:UBA domain 13 c2jvfA_ 44.4 33 PDB header:de novo protein Chain: A: PDB Molecule:de novo protein m7; PDBTitle: solution structure of m7, a computationally-designed2 artificial protein 14 d1asta_ 41.1 25 Fold:Zincin-like Superfamily:Metalloproteases ("zincins"), catalytic domain Family:Astacin 15 c3edhA_ 41.0 35 PDB header:hydrolase Chain: A: PDB Molecule:bone morphogenetic protein 1; PDBTitle: crystal structure of bone morphogenetic protein 1 protease2 domain in complex with partially bound dmso 16 c3lqbA_ 40.5 29 PDB header:hydrolase Chain: A: PDB Molecule:loc792177 protein; PDBTitle: crystal structure of the hatching enzyme zhe1 from the zebrafish danio2 rerio 17 d1hv5a_ 40.4 25 Fold:Zincin-like Superfamily:Metalloproteases ("zincins"), catalytic domain Family:Matrix metalloproteases, catalytic domain 18 d1y93a1 40.3 35 Fold:Zincin-like Superfamily:Metalloproteases ("zincins"), catalytic domain Family:Matrix metalloproteases, catalytic domain 19 d1fbla2 38.8 30 Fold:Zincin-like Superfamily:Metalloproteases ("zincins"), catalytic domain Family:Matrix metalloproteases, catalytic domain 20 d2ovxa1 38.2 30 Fold:Zincin-like Superfamily:Metalloproteases ("zincins"), catalytic domain Family:Matrix metalloproteases, catalytic domain 21 d1cgla_ not modelled 36.8 30 Fold:Zincin-like Superfamily:Metalloproteases ("zincins"), catalytic domain Family:Matrix metalloproteases, catalytic domain 22 d1hova_ not modelled 36.2 25 Fold:Zincin-like Superfamily:Metalloproteases ("zincins"), catalytic domain Family:Matrix metalloproteases, catalytic domain 23 d1hfca_ not modelled 36.1 30 Fold:Zincin-like Superfamily:Metalloproteases ("zincins"), catalytic domain Family:Matrix metalloproteases, catalytic domain 24 d1xuca1 not modelled 34.9 35 Fold:Zincin-like Superfamily:Metalloproteases ("zincins"), catalytic domain Family:Matrix metalloproteases, catalytic domain 25 d1q3aa_ not modelled 34.8 25 Fold:Zincin-like Superfamily:Metalloproteases ("zincins"), catalytic domain Family:Matrix metalloproteases, catalytic domain 26 c2jsdA_ not modelled 34.1 30 PDB header:hydrolase Chain: A: PDB Molecule:matrix metalloproteinase-20; PDBTitle: solution structure of mmp20 complexed with nngh 27 d1rm8a_ not modelled 32.5 35 Fold:Zincin-like Superfamily:Metalloproteases ("zincins"), catalytic domain Family:Matrix metalloproteases, catalytic domain 28 d1i76a_ not modelled 31.1 30 Fold:Zincin-like Superfamily:Metalloproteases ("zincins"), catalytic domain Family:Matrix metalloproteases, catalytic domain 29 d1qiba_ not modelled 30.6 25 Fold:Zincin-like Superfamily:Metalloproteases ("zincins"), catalytic domain Family:Matrix metalloproteases, catalytic domain 30 c3lq0A_ not modelled 28.5 27 PDB header:hydrolase Chain: A: PDB Molecule:proastacin; PDBTitle: zymogen structure of crayfish astacin metallopeptidase 31 c3lmcA_ not modelled 28.3 29 PDB header:hydrolase Chain: A: PDB Molecule:peptidase, zinc-dependent; PDBTitle: crystal structure of zinc-dependent peptidase from methanocorpusculum2 labreanum (strain z), northeast structural genomics consortium target3 mur16 32 c2xs4A_ not modelled 27.2 30 PDB header:hydrolase Chain: A: PDB Molecule:karilysin protease; PDBTitle: structure of karilysin catalytic mmp domain in complex with2 magnesium 33 d1mmqa_ not modelled 25.9 30 Fold:Zincin-like Superfamily:Metalloproteases ("zincins"), catalytic domain Family:Matrix metalloproteases, catalytic domain 34 c1slmA_ not modelled 25.3 25 PDB header:hydrolase Chain: A: PDB Molecule:stromelysin-1; PDBTitle: crystal structure of fibroblast stromelysin-1: the c-truncated human2 proenzyme 35 c3qyyB_ not modelled 24.6 12 PDB header:signaling protein/inhibitor Chain: B: PDB Molecule:response regulator; PDBTitle: a novel interaction mode between a microbial ggdef domain and the bis-2 (3, 5 )-cyclic di-gmp 36 d1cxva_ not modelled 24.4 35 Fold:Zincin-like Superfamily:Metalloproteases ("zincins"), catalytic domain Family:Matrix metalloproteases, catalytic domain 37 c3i5bA_ not modelled 21.5 24 PDB header:signaling protein Chain: A: PDB Molecule:wspr response regulator; PDBTitle: crystal structure of the isolated ggdef domain of wpsr from2 pseudomonas aeruginosa 38 d1hy7a_ not modelled 20.9 25 Fold:Zincin-like Superfamily:Metalloproteases ("zincins"), catalytic domain Family:Matrix metalloproteases, catalytic domain 39 d1eaka2 not modelled 18.8 25 Fold:Zincin-like Superfamily:Metalloproteases ("zincins"), catalytic domain Family:Matrix metalloproteases, catalytic domain 40 c3hvaA_ not modelled 18.6 21 PDB header:transferase Chain: A: PDB Molecule:protein fimx; PDBTitle: crystal structure of fimx ggdef domain from pseudomonas2 aeruginosa 41 c2a97B_ not modelled 17.0 17 PDB header:hydrolase Chain: B: PDB Molecule:botulinum neurotoxin type f; PDBTitle: crystal structure of catalytic domain of clostridium2 botulinum neurotoxin serotype f 42 d1w25a3 not modelled 15.6 17 Fold:Ferredoxin-like Superfamily:Nucleotide cyclase Family:GGDEF domain 43 c1jmtB_ not modelled 13.2 31 PDB header:rna binding protein Chain: B: PDB Molecule:splicing factor u2af 65 kda subunit; PDBTitle: x-ray structure of a core u2af65/u2af35 heterodimer 44 c3i5cA_ not modelled 11.2 24 PDB header:signaling protein Chain: A: PDB Molecule:fusion of general control protein gcn4 and wspr response PDBTitle: crystal structure of a fusion protein containing the leucine zipper of2 gcn4 and the ggdef domain of wspr from pseudomonas aeruginosa 45 c1om8A_ not modelled 10.9 12 PDB header:hydrolase Chain: A: PDB Molecule:serralysin; PDBTitle: crystal structure of a cold adapted alkaline protease from pseudomonas2 tac ii 18, co-crystallyzed with 10 mm edta 46 c1dowB_ not modelled 10.1 14 PDB header:cell adhesion Chain: B: PDB Molecule:beta-catenin; PDBTitle: crystal structure of a chimera of beta-catenin and alpha-2 catenin 47 c3ba0A_ not modelled 10.0 35 PDB header:hydrolase Chain: A: PDB Molecule:macrophage metalloelastase; PDBTitle: crystal structure of full-length human mmp-12 48 c3bkdC_ not modelled 9.7 50 PDB header:viral protein, membrane protein Chain: C: PDB Molecule:transmembrane domain of matrix protein m2; PDBTitle: high resolution crystal structure of transmembrane domain of m22 protein 49 c3bkdH_ not modelled 9.7 50 PDB header:viral protein, membrane protein Chain: H: PDB Molecule:transmembrane domain of matrix protein m2; PDBTitle: high resolution crystal structure of transmembrane domain of m22 protein 50 c3bkdB_ not modelled 9.7 50 PDB header:viral protein, membrane protein Chain: B: PDB Molecule:transmembrane domain of matrix protein m2; PDBTitle: high resolution crystal structure of transmembrane domain of m22 protein 51 c3bkdA_ not modelled 9.7 50 PDB header:viral protein, membrane protein Chain: A: PDB Molecule:transmembrane domain of matrix protein m2; PDBTitle: high resolution crystal structure of transmembrane domain of m22 protein 52 c3bkdG_ not modelled 9.7 50 PDB header:viral protein, membrane protein Chain: G: PDB Molecule:transmembrane domain of matrix protein m2; PDBTitle: high resolution crystal structure of transmembrane domain of m22 protein 53 c3bkdD_ not modelled 9.7 50 PDB header:viral protein, membrane protein Chain: D: PDB Molecule:transmembrane domain of matrix protein m2; PDBTitle: high resolution crystal structure of transmembrane domain of m22 protein 54 c3bkdE_ not modelled 9.7 50 PDB header:viral protein, membrane protein Chain: E: PDB Molecule:transmembrane domain of matrix protein m2; PDBTitle: high resolution crystal structure of transmembrane domain of m22 protein 55 c3bkdF_ not modelled 9.7 50 PDB header:viral protein, membrane protein Chain: F: PDB Molecule:transmembrane domain of matrix protein m2; PDBTitle: high resolution crystal structure of transmembrane domain of m22 protein 56 d1sata2 not modelled 9.7 18 Fold:Zincin-like Superfamily:Metalloproteases ("zincins"), catalytic domain Family:Serralysin-like metalloprotease, catalytic (N-terminal) domain 57 d3e11a1 not modelled 9.6 30 Fold:Zincin-like Superfamily:Metalloproteases ("zincins"), catalytic domain Family:TTHA0227-like 58 d1gtda_ not modelled 9.1 30 Fold:PurS-like Superfamily:PurS-like Family:PurS subunit of FGAM synthetase 59 d1bqqm_ not modelled 8.8 35 Fold:Zincin-like Superfamily:Metalloproteases ("zincins"), catalytic domain Family:Matrix metalloproteases, catalytic domain 60 c2rjqA_ not modelled 8.7 38 PDB header:hydrolase Chain: A: PDB Molecule:adamts-5; PDBTitle: crystal structure of adamts5 with inhibitor bound 61 c3iclA_ not modelled 8.5 21 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:eal/ggdef domain protein; PDBTitle: x-ray structure of protein (eal/ggdef domain protein) from2 m.capsulatus, northeast structural genomics consortium3 target mcr174c 62 c2erpA_ not modelled 8.5 38 PDB header:toxin Chain: A: PDB Molecule:vascular apoptosis-inducing protein 1; PDBTitle: crystal structure of vascular apoptosis-inducing protein-1(inhibitor-2 bound form) 63 d1kufa_ not modelled 8.4 30 Fold:Zincin-like Superfamily:Metalloproteases ("zincins"), catalytic domain Family:Reprolysin-like 64 c3ignA_ not modelled 8.1 19 PDB header:transferase Chain: A: PDB Molecule:diguanylate cyclase; PDBTitle: crystal structure of the ggdef domain from marinobacter2 aquaeolei diguanylate cyclase complexed with c-di-gmp -3 northeast structural genomics consortium target mqr89a 65 c2gjhA_ not modelled 7.7 35 PDB header:de novo protein Chain: A: PDB Molecule:designed protein; PDBTitle: nmr structure of cfr (c-terminal fragment of2 computationally designed novel-topology protein top7) 66 c3gr1A_ not modelled 7.6 10 PDB header:membrane protein Chain: A: PDB Molecule:protein prgh; PDBTitle: periplamic domain of the t3ss inner membrane protein prgh2 from s.typhimurium (fragment 170-392) 67 c2cltB_ not modelled 7.5 30 PDB header:hydrolase Chain: B: PDB Molecule:interstitial collagenase; PDBTitle: crystal structure of the active form (full-length) of human2 fibroblast collagenase. 68 c2zw2B_ not modelled 7.5 14 PDB header:ligase Chain: B: PDB Molecule:putative uncharacterized protein sts178; PDBTitle: crystal structure of formylglycinamide ribonucleotide amidotransferase2 iii from sulfolobus tokodaii (stpurs) 69 d1atla_ not modelled 7.5 25 Fold:Zincin-like Superfamily:Metalloproteases ("zincins"), catalytic domain Family:Reprolysin-like 70 c2dgbA_ not modelled 7.4 42 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:hypothetical protein purs; PDBTitle: structure of thermus thermophilus purs in the p21 form 71 d1k1fa_ not modelled 7.4 16 Fold:Bcr-Abl oncoprotein oligomerization domain Superfamily:Bcr-Abl oncoprotein oligomerization domain Family:Bcr-Abl oncoprotein oligomerization domain 72 c3pjwA_ not modelled 7.3 21 PDB header:lyase Chain: A: PDB Molecule:cyclic dimeric gmp binding protein; PDBTitle: structure of pseudomonas fluorescence lapd ggdef-eal dual domain, i23 73 c3b8zB_ not modelled 7.0 38 PDB header:hydrolase Chain: B: PDB Molecule:protein adamts-5; PDBTitle: high resolution crystal structure of the catalytic domain2 of adamts-5 (aggrecanase-2) 74 c2dw1B_ not modelled 6.8 30 PDB header:apoptosis, toxin Chain: B: PDB Molecule:catrocollastatin; PDBTitle: crystal structure of vap2 from crotalus atrox venom (form 2-2 crystal) 75 c3e5aB_ not modelled 6.7 17 PDB header:transferase Chain: B: PDB Molecule:targeting protein for xklp2; PDBTitle: crystal structure of aurora a in complex with vx-680 and tpx2 76 d1r55a_ not modelled 6.7 33 Fold:Zincin-like Superfamily:Metalloproteases ("zincins"), catalytic domain Family:Reprolysin-like 77 d1t4aa_ not modelled 6.7 31 Fold:PurS-like Superfamily:PurS-like Family:PurS subunit of FGAM synthetase 78 c3c0tB_ not modelled 6.4 67 PDB header:transcription Chain: B: PDB Molecule:mediator of rna polymerase ii transcription PDBTitle: structure of the schizosaccharomyces pombe mediator2 subcomplex med8c/18 79 c1p9iA_ not modelled 6.4 21 PDB header:unknown function Chain: A: PDB Molecule:cortexillin i/gcn4 hybrid peptide; PDBTitle: coiled-coil x-ray structure at 1.17 a resolution 80 d2b7ea1 not modelled 6.2 42 Fold:Another 3-helical bundle Superfamily:FF domain Family:FF domain 81 c3ipfA_ not modelled 6.2 25 PDB header:structural genomics, unknown function Chain: A: PDB Molecule:uncharacterized protein; PDBTitle: crystal structure of the q251q8_deshy protein from desulfitobacterium2 hafniense. northeast structural genomics consortium target dhr8c. 82 c2awyB_ not modelled 6.1 13 PDB header:oxygen storage/transport Chain: B: PDB Molecule:hemerythrin-like domain protein dcrh; PDBTitle: met-dcrh-hr 83 d2a6aa2 not modelled 6.1 29 Fold:Ribonuclease H-like motif Superfamily:Actin-like ATPase domain Family:YeaZ-like 84 d1qf6a4 not modelled 6.0 19 Fold:Class II aaRS and biotin synthetases Superfamily:Class II aaRS and biotin synthetases Family:Class II aminoacyl-tRNA synthetase (aaRS)-like, catalytic domain 85 c3o7kA_ not modelled 6.0 7 PDB header:lyase Chain: A: PDB Molecule:ohcu decarboxylase; PDBTitle: crystal structure of 2-oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline2 decarboxylase from klebsiella pneumoniae 86 c3b6nA_ not modelled 5.8 14 PDB header:lyase Chain: A: PDB Molecule:2-c-methyl-d-erythritol 2,4-cyclodiphosphate PDBTitle: crystal structure of 2c-methyl-d-erythritol 2,4-2 cyclodiphosphate synthase pv003920 from plasmodium vivax 87 c2ppwA_ not modelled 5.8 11 PDB header:isomerase Chain: A: PDB Molecule:conserved domain protein; PDBTitle: the crystal structure of uncharacterized ribose 5-phosphate isomerase2 rpib from streptococcus pneumoniae 88 c3f6nA_ not modelled 5.8 29 PDB header:viral protein, dna-binding protein Chain: A: PDB Molecule:virion-associated protein; PDBTitle: crystal structure of the virion-associated protein p3 from2 caulimovirus 89 d1kapp2 not modelled 5.6 30 Fold:Zincin-like Superfamily:Metalloproteases ("zincins"), catalytic domain Family:Serralysin-like metalloprotease, catalytic (N-terminal) domain 90 d2g8la1 not modelled 5.6 13 Fold:AF1104-like Superfamily:AF1104-like Family:AF1104-like 91 c2kadA_ not modelled 5.6 40 PDB header:membrane protein Chain: A: PDB Molecule:transmembrane peptide of matrix protein 2; PDBTitle: magic-angle-spinning solid-state nmr structure of influenza2 a m2 transmembrane domain 92 c2kadB_ not modelled 5.6 40 PDB header:membrane protein Chain: B: PDB Molecule:transmembrane peptide of matrix protein 2; PDBTitle: magic-angle-spinning solid-state nmr structure of influenza2 a m2 transmembrane domain 93 c2kadD_ not modelled 5.6 40 PDB header:membrane protein Chain: D: PDB Molecule:transmembrane peptide of matrix protein 2; PDBTitle: magic-angle-spinning solid-state nmr structure of influenza2 a m2 transmembrane domain 94 c2kadC_ not modelled 5.6 40 PDB header:membrane protein Chain: C: PDB Molecule:transmembrane peptide of matrix protein 2; PDBTitle: magic-angle-spinning solid-state nmr structure of influenza2 a m2 transmembrane domain 95 c2v4bB_ not modelled 5.6 18 PDB header:hydrolase Chain: B: PDB Molecule:adamts-1; PDBTitle: crystal structure of human adamts-1 catalytic domain and2 cysteine-rich domain (apo-form) 96 c3dl1A_ not modelled 5.5 27 PDB header:hydrolase Chain: A: PDB Molecule:putative metal-dependent hydrolase; PDBTitle: crystal structure of a putative metal-dependent hydrolase2 (yp_001336084.1) from klebsiella pneumoniae subsp. pneumoniae mgh3 78578 at 2.20 a resolution 97 c1fdfA_ not modelled 5.5 29 PDB header:signaling protein Chain: A: PDB Molecule:rhodopsin; PDBTitle: helix 7 bovine rhodopsin 98 d1qmya_ not modelled 5.4 38 Fold:Cysteine proteinases Superfamily:Cysteine proteinases Family:FMDV leader protease 99 c3k4tB_ not modelled 5.4 29 PDB header:viral protein, dna-binding protein Chain: B: PDB Molecule:virion-associated protein; PDBTitle: crystal structure of the virion-associated protein p3 from2 caulimovirus