PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: c3dl1A_

Fold library id	PDB Header	Molecule	Title
c3dl1A_	PDB header: hydrolase	Chain: A: PDB Molecule: putative metal-dependent hydrolase;	PDBTitle: crystal structure of a putative metal-dependent hydrolase2 (yp_001336084.1) from klebsiella pneumoniae subsp.3 pneumoniae mgh 78578 at 2.20 a resolution

Links to external resources
Added to library: Tue Mar 16 12:32:59 2010

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence E X P W E Q A L A I P V L A H L S S T E Q H K L T Q X A A R F L Q Q K R L V A L Q G L E L T P L H Q A R I A X L F C L P V L E L G I E W L D

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T
S G G G T T
S
T T
G G G T T T
G G G G T

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence G F H E V L I Y P A P F Q Q G P V V L N W L D I Q D S F D A S G F N L V V H E V A H K L D T R D R A S G V P L I P L R E V A G W E H D L H A

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T
S S S
T T S S S S
S S
S
G G G

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence A X N N I Q D E I D L V G E S A A S I D A Y A A T D P A E C F A V L S E Y F F S A P E L F A P R F P A L W Q R F C H F Y R Q D P L A R R R E

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T T S S S
T T T T T
G G G T T T T
T

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

Interactive 3D view in JSmol

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Accessibility Statement

Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

© Structural Bioinformatics Group, Imperial College, London

Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	E	X	P	W	E	Q	A	L	A	I	P	V	L	A	H	L	S	S	T	E	Q	H	K	L	T	Q	X	A	A	R	F	L	Q	Q	K	R	L	V	A	L	Q	G	L	E	L	T	P	L	H	Q	A	R	I	A	X	L	F	C	L	P	V	L	E	L	G	I	E	W	L	D
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)								T		S	G	G	G	T	T																				S						T	T																	G	G	G	T	T	T		G	G	G	G	T
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	G	F	H	E	V	L	I	Y	P	A	P	F	Q	Q	G	P	V	V	L	N	W	L	D	I	Q	D	S	F	D	A	S	G	F	N	L	V	V	H	E	V	A	H	K	L	D	T	R	D	R	A	S	G	V	P	L	I	P	L	R	E	V	A	G	W	E	H	D	L	H	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T		S						S	S																	T	T	S	S	S	S																			S	S			S			G	G	G
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	A	X	N	N	I	Q	D	E	I	D	L	V	G	E	S	A	A	S	I	D	A	Y	A	A	T	D	P	A	E	C	F	A	V	L	S	E	Y	F	F	S	A	P	E	L	F	A	P	R	F	P	A	L	W	Q	R	F	C	H	F	Y	R	Q	D	P	L	A	R	R	R	E
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)														T	T	T	S	S	S		T	T	T	T	T																	G	G	G	T	T	T	T													T