Return to main results Retrieve Phyre Job Id

Job DescriptionP31663
Confidence69.31%DateThu Jan 5 11:48:25 GMT 2012
Rank67Aligned Residues179
% Identity13%Templated1i6la_
SCOP infoAdenine nucleotide alpha hydrolase-like Nucleotidylyl transferase Class I aminoacyl-tRNA synthetases (RS), catalytic domain
Resolution1.72

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   24.....30....... ..40.........50........ .60.........70.........80........ .90.. .
Predicted Secondary structure 






.


.













........
Query SS confidence 













.




















.





























. . . .



. . . .
Query Sequence  VALVPTMGNLHDGH. MKLVDEAKARADVVVVSIFVN. PMQFDRPEDLARYPRTLQEDCEKLNKRKVD. . . . LVFA. . . . P
Query Conservation 










 

.



  
    
 







.
 

   

   


 
  
  

   


.... 

 ....
Alig confidence 





.






.




















.





























....



....
Template Conservation 

  

.
 



  
        

 
      


 

         
            
 
 

 
  
  

   
Template Sequence  SGIQPS. GVITIGNYIGALRQFVELQHEYNCYFCIVDQHAITVWQDPHELRQNIRRLAALYLAVGIDPTQATLFIQSEVP
Template Known Secondary structure 


.S

BTTTTS
TTS


TT

TTTSGGG
T
Template Predicted Secondary structure 




.






















Template SS confidence 















































































   6...10. ........20.........30.........40.........50.........60.........70.........80....
 
   94.....100.........110...... ...120.........130.........140.........150.........160.....
Predicted Secondary structure 









........

















Query SS confidence 






















. . . . . . . .
















































Query Sequence  SVKEIYPNGTETHTYVDVPGLST. . . . . . . . MLEGASRPGHFRGVSTIVSKLFNLVQPDIACFGEKDFQQLALIRKMVAD
Query Conservation     



 
      
    
  ........ 


  




 

 


 





 
  
 




 


 


 

 
Alig confidence 





...













........























.























Template Conservation     

 ...  
     
  
 
    
               

 





   .   


 
 

     





 
Template Sequence  AHAQAA. . . WXLQCIVYIGELERXTQFKEKSAGKEAVSAGLLTYPPLXAADILLY. NTDIVPVGEDQKQHIELTRDLAER
Template Known Secondary structure  ...TTS
T
TT
SS

TTT.T
S

GGG
Template Predicted Secondary structure  ...









.




Template SS confidence 















































































   85....90 .........100.........110.........120.........130...... ...140.........150.........160
 
   166 ...170.........180..... ....190 .........200.......
Predicted Secondary structure 
........










......




....



Query SS confidence 
. . . . . . . .


















. . . . . .




. . . .
















Query Sequence  M. . . . . . . . GFDIEIVGVPIMRAKDGLA. . . . . . LSSRN. . . . GYLTAEQRKIAPGLYKV
Query Conservation 
........   
 
   




 



...... 



....  

  

  
  
  
Alig confidence 
........


















......




....
















Template Conservation             
          
  
     




     
 
 
 
    
  

  
Template Sequence  FNKRYGELFTIPEARIPKVGARIXSLVDPTKKXSKSDPNPKAYITLLDDAKTIEKKIKSA
Template Known Secondary structure 
S






SSSSS
B
SS
TTSB

TT
S
GGG

BTT


Template Predicted Secondary structure 





































Template SS confidence 



























































   161........170.........180.........190.........200.........210.........220
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions