Job Description P31663 Confidence 97.02% Date Thu Jan 5 11:48:25 GMT 2012 Rank 13 Aligned Residues 130 % Identity 18% Template c3gmiA_ PDB info PDB header:structural genomics, unknown function Chain: A: PDB Molecule:upf0348 protein mj0951; PDBTitle: crystal structure of a protein of unknown function from2 methanocaldococcus jannaschii Resolution 1.91 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.		.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
Predicted Secondary structure																																																		.
Query SS confidence																																																		.
Query Sequence		I	E	T	L	P	L	L	R	Q	Q	I	R	R	L	R	M	E	G	K	R	V	A	L	V	P	T	M	G	N	L	H	D	G	H	M	K	L	V	D	E	A	K	A	R	A	D	V	V	.	V	V	S	I	F	V	N	P	M	Q	F	D	R	P	E	D	L	A	R	Y	P	R	T	L	Q	E	D	C	E	K	L
Query Conservation																																																		.
Alig confidence																																																		.																		.	.	.	.	.
Template Conservation																																																																				.	.	.	.	.
Template Sequence		F	K	D	F	K	K	I	V	E	E	I	K	E	R	E	N	K	D	K	I	V	C	D	F	T	E	Y	N	P	L	H	K	G	H	K	Y	A	L	E	K	G	K	E	H	G	I	F	I	S	V	L	P	G	P	L	E	R	S	G	R	G	I	P	Y	F	L	.	.	.	.	.	N	R	Y	I	R	A	E	M	A
Template Known Secondary structure																	T												T	T														T	S	S									T	T	S	B		T	T	S	S	B		S	S	.	.	.	.	.
Template Predicted Secondary structure																																																																				.	.	.	.	.
Template SS confidence
		33	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.						.	100	.	.	.	.	.	.	.
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	K	R	K	V	D	L	V	F	A	P	S	V	K	E	I	Y	P	N	G	T	E	T	H	T	Y	V	D	V	P	G	L	S	T	M	L	E	G	A	S	R	P	G	H	F	R	G	V	S	T	I	V	S	K	L	F	N	L	V	Q	P	D	I	A	C	F	G	E	K	D	F	Q	Q	L	A	L	I	R	K	M
Query Conservation
Alig confidence										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.					.	.	.	.	.											.	.	.
Template Conservation										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.					.	.	.	.	.											.	.	.
Template Sequence		I	R	A	G	A	D	I	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	E	G	P	.	.	.	.	.	P	M	G	I	M	G	S	G	Q	Y	.	.	.	M	R	C	L	I	K	M	F	Y	S	L	G	A	E	I	I	P	R	G	Y	I	P	E	K	T	M	E	K	V	I	D	C
Template Known Secondary structure					T		S			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.					.	.	.	.	.		G	G	G	S						.	.	.												T
Template Predicted Secondary structure										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.					.	.	.	.	.											.	.	.
Template SS confidence
		108	.	110	.	.	.	.	.																			.	.	.	.						120	.	.	.	.	.	.	.	.	.				130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.
		163	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		I	N
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		162	.

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions