Job Description P31663 Confidence 76.85% Date Thu Jan 5 11:48:25 GMT 2012 Rank 66 Aligned Residues 178 % Identity 16% Template c2yy5C_ PDB info PDB header:ligase Chain: C: PDB Molecule:tryptophanyl-trna synthetase; PDBTitle: crystal structure of tryptophanyl-trna synthetase from mycoplasma2 pneumoniae Resolution 2.55 Å

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		25	.	.	.	.	30	.	.	.	.	.	.	.		.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60		.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.					.	90	.	.					.	.
Predicted Secondary structure															.																								.																													.	.	.	.					.	.	.	.
Query SS confidence															.																								.																													.	.	.	.					.	.	.	.
Query Sequence		A	L	V	P	T	M	G	N	L	H	D	G	H	.	M	K	L	V	D	E	A	K	A	R	A	D	V	V	V	V	S	I	F	V	N	P	M	.	Q	F	D	R	P	E	D	L	A	R	Y	P	R	T	L	Q	E	D	C	E	K	L	N	K	R	K	V	D	.	.	.	.	L	V	F	A	.	.	.	.	P	S
Query Conservation															.																								.																													.	.	.	.					.	.	.	.
Alig confidence							.								.																								.																													.	.	.	.					.	.	.	.
Template Conservation							.
Template Sequence		G	I	Q	A	S	.	G	K	Q	H	L	G	N	Y	L	G	V	M	Q	S	L	I	E	L	Q	E	Q	C	Q	L	F	V	F	V	A	D	L	H	S	I	T	V	D	F	Q	P	Q	A	L	K	Q	N	N	F	D	L	V	R	T	L	L	A	V	G	L	D	P	Q	K	A	C	L	F	L	Q	S	D	L	L	E
Template Known Secondary structure							.	T	T		B							T	T	T	T								S												T	T	S																					T	T			T	T	T						G	G	G		T
Template Predicted Secondary structure							.
Template SS confidence
		8	.	10	.	.		.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.
		95	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.							.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.
Predicted Secondary structure																										.	.	.	.	.	.																																																	.	.
Query SS confidence																										.	.	.	.	.	.																																																	.	.
Query Sequence		V	K	E	I	Y	P	N	G	T	E	T	H	T	Y	V	D	V	P	G	L	S	T	M	L	.	.	.	.	.	.	E	G	A	S	R	P	G	H	F	R	G	V	S	T	I	V	S	K	L	F	N	L	V	Q	P	D	I	A	C	F	G	E	K	D	F	Q	Q	L	A	L	I	R	K	M	V	A	D	M	.	.
Query Conservation																										.	.	.	.	.	.																																																	.	.
Alig confidence							.	.	.																	.	.	.	.	.	.																							.																										.	.
Template Conservation							.	.	.																																													.
Template Sequence		H	S	M	M	G	.	.	.	Y	L	M	M	V	Q	S	N	L	G	E	L	Q	R	M	T	Q	F	K	A	K	K	A	L	N	I	P	T	G	L	L	T	Y	P	A	L	M	A	G	D	I	L	L	Y	.	Q	P	D	I	V	P	V	G	N	D	Q	K	Q	H	L	E	L	T	R	D	L	A	Q	R	I	Q	K
Template Known Secondary structure							.	.	.						T	S													G	G	G						T															T	T	.			S						G	G	G
Template Predicted Secondary structure							.	.	.																																													.
Template SS confidence
		87	.	.	90	.				.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.		.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.
								167	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.					.	.			.	.	.	190					.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.																			.	.	.	.			.	.					.	.	.	.
Query SS confidence		.	.	.	.	.	.																			.	.	.	.			.	.					.	.	.	.
Query Sequence		.	.	.	.	.	.	G	F	D	I	E	I	V	G	V	P	I	M	R	A	K	D	G	L	.	.	.	.	A	L	.	.	S	S	R	N	.	.	.	.	G	Y	L	T	A	E	Q	R	K	I	A	P	G	L	Y	K	V
Query Conservation		.	.	.	.	.	.																			.	.	.	.			.	.					.	.	.	.
Alig confidence		.	.	.	.	.	.																			.	.	.	.			.	.					.	.	.	.
Template Conservation
Template Sequence		K	F	K	L	K	L	R	L	P	Q	F	V	Q	N	K	D	T	N	R	I	M	D	L	F	D	P	T	K	K	M	S	K	S	S	K	N	Q	N	G	V	I	Y	L	D	D	P	K	E	V	V	V	K	K	I	R	Q	A
Template Known Secondary structure																T	T	T	T	T		B		S	S		T	T	S	B			T	T		S		G	G	G			B	T	T
Template Predicted Secondary structure
Template SS confidence
		172	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions