 |
| Job Description | P31663 | | Confidence | 20.46% | Date | Thu Jan 5 11:48:25 GMT 2012 |
| Rank | 131 | Aligned Residues | 24 |
| % Identity | 21% | Template | c2vz4A_ |
| PDB info |
PDB header:transcription | Chain: A: PDB Molecule:hth-type transcriptional activator tipa; |
PDBTitle: the n-terminal domain of merr-like protein tipal bound to2 promoter dna
|
| Resolution | 2.90 Å |
|
| | |
147 | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . |
| Predicted Secondary structure | |
 | |  |
|
|
|  | | | | | | | | | | | | |
|
|
|
|
| |
| Query SS confidence | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| Query Sequence | |
C | F | G | E | K | D | F | Q | Q | L | A | L | I | R | K | M | V | A | D | M | G | F | D | I | E |
| Query Conservation | |
|
|
|
|
|
| |
|
|
| |
|
|
| |
|
| |
|
| | | |
| |
| Alig confidence | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
| Template Conservation | |
|
| | | | |
| | |
| | |
| | |
| . | | | |
| | |
| |
| Template Sequence | |
R | Y | S | D | A | D | L | D | R | L | Q | Q | I | L | F | Y | . |
R | E | L | G | F | P | L | D |
| Template Known Secondary structure | |
| B |
| | | | | | | | | | | | | | . | | | T | T |
|
| | |
| Template Predicted Secondary structure | |
|
|
| | | | | | | | | | | | | | . | | |
|
|
|
| | |
| Template SS confidence | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| | |
40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | |
. | . | . | . | 60 | . | . | . |
| |
No model constructed - rank, confidence too low
Phyre is for academic use only
| Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
| Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
| |
|
|
|
