Job Description P31663 Confidence 87.96% Date Thu Jan 5 11:48:25 GMT 2012 Rank 55 Aligned Residues 195 % Identity 14% Template c2j5bA_ PDB info PDB header:ligase Chain: A: PDB Molecule:tyrosyl-trna synthetase; PDBTitle: structure of the tyrosyl trna synthetase from acanthamoeba2 polyphaga mimivirus complexed with tyrosynol Resolution 2.20 Å

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		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.		.		.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.					60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.
Predicted Secondary structure																																				.		.																						.	.	.	.
Query SS confidence																																				.		.																						.	.	.	.
Query Sequence		I	E	T	L	P	L	L	R	Q	Q	I	R	R	L	R	M	E	G	K	R	V	A	L	V	P	T	M	G	N	L	H	D	G	H	.	M	.	K	L	V	D	E	A	K	A	R	A	D	V	V	V	V	S	I	F	V	N	P	.	.	.	.	M	Q	F	D	R	P	E	D	L	A	R	Y	P	R	T	L	Q	E
Query Conservation																																				.		.																						.	.	.	.
Alig confidence																												.								.		.																						.	.	.	.
Template Conservation																												.
Template Sequence		C	E	T	L	D	R	L	K	Q	L	V	D	S	G	R	I	F	T	A	Y	N	G	F	E	P	S	.	G	R	I	H	I	A	Q	A	L	I	T	V	M	N	T	N	N	M	I	E	C	G	G	Q	M	I	I	Y	I	A	D	W	F	A	K	M	N	L	K	M	N	G	D	I	N	K	I	R	E	L	G	R	Y
Template Known Secondary structure			S												T													.	S	S		B																	T	T															T	T	G	G	G	G
Template Predicted Secondary structure																												.
Template SS confidence
		15	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40		.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.
		78	.	80	.	.	.	.	.	.	.	.				.	90	.	.						.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.		140	.	.	.	.	.	.	.	.
Predicted Secondary structure													.	.	.					.	.	.	.	.																																																.
Query SS confidence													.	.	.					.	.	.	.	.																																																.
Query Sequence		D	C	E	K	L	N	K	R	K	V	D	.	.	.	L	V	F	A	.	.	.	.	.	P	S	V	K	E	I	Y	P	N	G	T	E	T	H	T	Y	V	D	V	P	G	L	S	T	M	L	E	G	A	S	R	P	G	H	F	R	G	V	S	T	I	V	S	K	L	F	N	.	L	V	Q	P	D	I	A	C	F
Query Conservation													.	.	.					.	.	.	.	.																																																.
Alig confidence													.	.	.					.	.	.	.	.								.	.	.	.	.	.	.	.																																	.
Template Conservation																																.	.	.	.	.	.	.	.
Template Sequence		F	I	E	V	F	K	A	C	G	I	N	L	D	G	T	R	F	I	W	A	S	E	F	I	A	S	N	P	S	Y	.	.	.	.	.	.	.	.	I	E	R	M	L	D	I	A	E	F	S	T	I	S	R	V	K	R	I	F	Y	P	C	M	Q	A	A	D	V	F	E	L	V	P	E	G	I	D	I	C	Q	L
Template Known Secondary structure									T	T			G	G	G																	.	.	.	.	.	.	.	.																	T															S	S	T	T			S
Template Predicted Secondary structure																																.	.	.	.	.	.	.	.
Template SS confidence
		94	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.									.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.
		149	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.		.	.	.	.	.	.	.	.	180	.	.	.			.	.	.	.	.	.	190					.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.
Predicted Secondary structure																									.													.	.								.	.	.	.
Query SS confidence																									.													.	.								.	.	.	.
Query Sequence		G	E	K	D	F	Q	Q	L	A	L	I	R	K	M	V	A	D	M	G	F	D	I	E	.	I	V	G	V	P	I	M	R	A	K	D	G	.	.	L	A	L	S	S	R	N	.	.	.	.	G	Y	L	T	A	E	Q	R	K	I	A	P	G	L	Y	K	V
Query Conservation																									.													.	.								.	.	.	.
Alig confidence																									.													.	.								.	.	.	.
Template Conservation
Template Sequence		G	I	D	Q	R	K	V	N	M	L	A	I	E	Y	A	N	D	R	G	L	K	I	P	I	S	L	S	H	H	M	L	M	S	L	S	G	P	K	K	K	M	S	K	S	D	P	Q	G	A	I	F	M	D	D	T	E	Q	E	V	S	E	K	I	S	R	A
Template Known Secondary structure		B	G	G	G														T	T									B						T	T		S	S				S	T	T		G	G	G	S		B	T	T													S
Template Predicted Secondary structure
Template SS confidence
		183	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions