Job Description P31663 Confidence 65.41% Date Thu Jan 5 11:48:25 GMT 2012 Rank 71 Aligned Residues 205 % Identity 16% Template c2el7A_ PDB info PDB header:ligase Chain: A: PDB Molecule:tryptophanyl-trna synthetase; PDBTitle: crystal structure of tryptophanyl-trna synthetase from thermus2 thermophilus Resolution 2.50 Å

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		25	.	.	.	.	30	.	.	.	.	.	.	.	.	.		40	.	.	.	.	.				.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.			.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.					.	90	.	.
Predicted Secondary structure																	.							.	.	.																			.	.																										.	.	.	.					.	.
Query SS confidence																	.							.	.	.																			.	.																										.	.	.	.					.	.
Query Sequence		A	L	V	P	T	M	G	N	L	H	D	G	H	M	K	.	L	V	D	E	A	K	.	.	.	A	R	A	D	V	V	V	V	S	I	F	V	N	P	M	Q	F	D	.	.	R	P	E	D	L	A	R	Y	P	R	T	L	Q	E	D	C	E	K	L	N	K	R	K	V	D	.	.	.	.	L	V	F	A	.	.
Query Conservation																	.							.	.	.																			.	.																										.	.	.	.					.	.
Alig confidence							.										.							.	.	.																			.	.																										.	.	.	.					.	.
Template Conservation							.
Template Sequence		G	I	Q	P	S	.	G	E	I	H	I	G	N	Y	L	G	A	I	K	Q	W	V	A	I	G	E	K	L	G	R	D	A	F	F	C	I	V	D	Y	H	A	L	T	N	P	L	A	Y	D	P	S	T	L	A	Q	R	T	F	E	A	A	L	V	N	I	A	A	G	L	D	P	E	K	V	T	L	F	V	Q	S
Template Known Secondary structure					S		.	S			B						T													G	G	G							G	G	G	G	G	G	S	T	T	T	S																				T			T	T	T	S					G	G
Template Predicted Secondary structure							.
Template SS confidence
		7	.	.	10	.		.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.
				93	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.										.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.
Predicted Secondary structure		.	.																																.	.	.	.	.	.	.	.	.
Query SS confidence		.	.																																.	.	.	.	.	.	.	.	.
Query Sequence		.	.	P	S	V	K	E	I	Y	P	N	G	T	E	T	H	T	Y	V	D	V	P	G	L	S	T	M	L	E	G	A	S	R	.	.	.	.	.	.	.	.	.	P	G	H	F	R	G	V	S	T	I	V	S	K	L	F	N	L	V	Q	P	D	I	A	C	F	G	E	K	D	F	Q	Q	L	A	L	I	R	K
Query Conservation		.	.																																.	.	.	.	.	.	.	.	.
Alig confidence		.	.								.	.	.																						.	.	.	.	.	.	.	.	.																.	.
Template Conservation											.	.	.																																														.	.
Template Sequence		H	V	P	E	H	T	E	L	S	.	.	.	W	V	F	T	T	L	T	P	L	G	D	L	T	R	M	T	Q	F	K	D	K	A	S	K	Q	E	T	V	W	S	G	L	L	M	Y	P	V	L	Q	A	A	D	I	L	I	.	.	Y	K	A	D	T	V	P	V	G	E	D	Q	V	Q	H	I	E	L	T	R	E
Template Known Secondary structure		G	S	T							.	.	.						T	S							T	S							T	T	S	S	S																				.	.	T	T								G	G	G
Template Predicted Secondary structure											.	.	.																																														.	.
Template SS confidence
		86	.	.	.	90	.	.	.	.				.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.			140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
		162	.	.	.	.	.									.	.	170	.	.	.	.			.	.	.	.	.	180	.	.	.	.		.	.	.	.	.	190				.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.																				.
Predicted Secondary structure								.	.	.	.	.	.	.	.								.	.											.							.	.	.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence								.	.	.	.	.	.	.	.								.	.											.							.	.	.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		M	V	A	D	M	G	.	.	.	.	.	.	.	.	F	D	I	E	I	V	G	.	.	V	P	I	M	R	A	K	D	G	L	.	A	L	S	S	R	N	.	.	.	G	Y	L	T	A	E	Q	R	K	I	A	P	G	L	Y	K	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L
Query Conservation								.	.	.	.	.	.	.	.								.	.											.							.	.	.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence								.	.	.	.	.	.	.	.								.	.											.							.	.	.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		I	A	R	R	F	N	H	L	F	G	E	T	F	P	E	P	Q	A	L	L	N	P	E	A	P	R	V	P	G	I	D	G	K	A	K	M	S	K	S	L	G	N	T	I	G	L	L	E	P	E	E	S	I	W	Q	K	I	Q	H	L	P	D	D	P	T	I	L	F	T	Y	L	S	Y	F	A	P	K	D	L	V
Template Known Secondary structure											S	S											T	T	S				B		T	T	S	S	S	B			T	T	T	T				B	S	S	S											T																S
Template Predicted Secondary structure
Template SS confidence
		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240
		209	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	S	I	A	D	K	L	Q	A	G	E	R	D	L	D	E	I	I	T	I	A	G	Q	E	L	N	E
Query Conservation
Alig confidence
Template Conservation
Template Sequence		E	A	L	K	E	E	Y	R	K	A	G	V	G	T	Y	V	V	K	R	I	L	F	D	H	L	M	E
Template Known Secondary structure										T	T		S
Template Predicted Secondary structure
Template SS confidence
		254	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions