Job Description P31663 Confidence 26.82% Date Thu Jan 5 11:48:25 GMT 2012 Rank 119 Aligned Residues 223 % Identity 13% Template c2dlcX_ PDB info PDB header:ligase/trna Chain: X: PDB Molecule:tyrosyl-trna synthetase, cytoplasmic; PDBTitle: crystal structure of the ternary complex of yeast tyrosyl-trna2 synthetase Resolution 2.40 Å

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		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.					.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.			.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.			.	.	.	.	.	.	.	70	.	.	.	.	.
Predicted Secondary structure																							.	.	.	.																						.	.																		.	.
Query SS confidence																							.	.	.	.																						.	.																		.	.
Query Sequence		I	E	T	L	P	L	L	R	Q	Q	I	R	R	L	R	M	E	G	K	R	V	.	.	.	.	A	L	V	P	T	M	G	N	L	H	D	G	H	M	K	L	V	D	E	A	K	.	.	A	R	A	D	V	V	V	V	S	I	F	V	N	P	M	Q	F	.	.	D	R	P	E	D	L	A	R	Y	P	R	T	L
Query Conservation																							.	.	.	.																						.	.																		.	.
Alig confidence													.	.	.								.	.	.	.						.																.	.																		.	.
Template Conservation													.	.	.																	.
Template Sequence		V	L	N	P	Q	I	I	K	D	V	L	.	.	.	E	V	Q	K	R	H	L	K	L	Y	W	G	T	A	P	T	.	G	R	P	H	C	G	Y	F	V	P	M	T	K	L	A	D	F	L	K	A	G	C	E	V	T	V	L	L	A	D	L	H	A	F	L	D	N	M	K	A	P	L	E	V	V	N	Y	R	A
Template Known Secondary structure													.	.	.		T	S		S												.	S			B	G	G	G													T	T															T	T	T	S	S		T	T
Template Predicted Secondary structure													.	.	.																	.
Template SS confidence
		23	.	.	.	.	.	.	30	.	.	.				.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.		50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.
		76	.	.	.	80					.	.	.	.	.	.	.	.					.	90	.	.					.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.							.	.	.	.	.	130	.	.	.	.	.	.	.
Predicted Secondary structure							.	.	.	.									.	.	.	.					.	.	.	.																																	.	.	.	.	.	.
Query SS confidence							.	.	.	.									.	.	.	.					.	.	.	.																																	.	.	.	.	.	.
Query Sequence		Q	E	D	C	E	.	.	.	.	K	L	N	K	R	K	V	D	.	.	.	.	L	V	F	A	.	.	.	.	P	S	V	K	E	I	Y	P	N	G	T	E	T	H	T	Y	V	D	V	P	G	L	S	T	M	L	E	G	A	S	R	P	.	.	.	.	.	.	G	H	F	R	G	V	S	T	I	V	S	K	L
Query Conservation							.	.	.	.									.	.	.	.					.	.	.	.																																	.	.	.	.	.	.
Alig confidence							.	.	.	.									.	.	.	.					.	.	.	.																																	.	.	.	.	.	.
Template Conservation
Template Sequence		K	Y	Y	E	L	T	I	K	A	I	L	R	S	I	N	V	P	I	E	K	L	K	F	V	V	G	S	S	Y	Q	L	T	P	D	Y	T	M	D	I	F	R	L	S	N	I	V	S	Q	N	D	A	K	R	A	G	A	D	V	V	K	Q	V	A	N	P	L	L	S	G	L	I	Y	P	L	M	Q	A	L	D	E
Template Known Secondary structure															T	T				T	T						T					T	S												T	T	S									T	T	T	T	S				S	S			T
Template Predicted Secondary structure
Template SS confidence
		99	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.
		138	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.
Predicted Secondary structure																																																																								.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																																								.	.	.	.	.	.	.	.	.	.
Query Sequence		F	N	L	V	Q	P	D	I	A	C	F	G	E	K	D	F	Q	Q	L	A	L	I	R	K	M	V	A	D	M	G	F	D	I	E	I	V	G	V	P	I	M	R	A	K	D	G	L	A	L	S	S	R	N	G	Y	L	T	A	E	Q	R	K	I	A	P	G	L	Y	K	V	.	.	.	.	.	.	.	.	.	.
Query Conservation																																																																								.	.	.	.	.	.	.	.	.	.
Alig confidence					.																																		.	.													.	.																		.	.	.	.	.	.	.	.	.	.
Template Conservation					.																																		.	.													.	.
Template Sequence		Q	F	L	.	D	V	D	C	Q	F	G	G	V	D	Q	R	K	I	F	V	L	A	E	E	N	L	P	S	L	G	Y	K	K	R	A	H	L	.	.	M	N	P	M	V	P	G	L	A	N	S	K	.	.	I	D	L	L	E	E	P	K	Q	V	K	K	K	I	N	S	A	F	C	S	P	G	N	V	E	E	N
Template Known Secondary structure				T	.	T		S						G	G	G											G	G	G	G	T								.	.												S	.	.		B	T	T													S				T	T			S	S
Template Predicted Secondary structure					.																																		.	.													.	.
Template SS confidence
		179	180	.		.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.			.	.	.	.	.	220	.	.	.	.	.	.			.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.
																																											208	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	S	S	I	A	D	K	L	Q	A	G	E	R	D	L	D	E	I	I	T	I	A	G	Q	E	L	N	E
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		G	L	L	S	F	V	Q	Y	V	I	A	P	I	Q	E	L	K	F	G	T	N	H	F	E	F	F	I	D	R	P	E	K	F	G	G	P	I	T	Y	K	S	F	E	E	M	K	L	A	F	K	E	E	K	L	S	P	P	D	L	K	I	G	V	A	D	A	I	N	E
Template Known Secondary structure										T							T	S	S	S	T	T										G	G	G	S						S	S										T	T	S	S
Template Predicted Secondary structure
Template SS confidence
		264	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions