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Job DescriptionP31663
Confidence94.83%DateThu Jan 5 11:48:25 GMT 2012
Rank32Aligned Residues230
% Identity18%Templatec2cybA_
PDB info PDB header:ligaseChain: A: PDB Molecule:tyrosyl-trna synthetase; PDBTitle: crystal structure of tyrosyl-trna synthetase complexed with2 l-tyrosine from archaeoglobus fulgidus
Resolution1.80 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   4.....10.........20.........30.........40.........50 .........60. ........70.........80
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Query Sequence  IETLPLLRQQIRRLRMEGKRVALVPTMGNLHDGHMKLVDEAKARADV. VVVSIFVNPMQ. . FDRPEDLARYPRTLQEDCE
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Template Sequence  VVTEEELRQLIETKEKPRAYVGYEPS. GEIHLGHMMTVQKLMDLQEAGFEIIVLLADIHAYLNEKGTFEEIAEVADYNKK
Template Known Secondary structure  TS
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.S

BTT

TT


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   17..20.........30.........40.. .......50.........60.........70.........80.........90.....
 
   81....... .90.. .......100.........110.........120... ......130.........140......
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Query Sequence  KLNKRKVD. . . . LVFA. . . . PSVKEIYPNGTETHTYVDVPGLSTMLEGASR. . . . . . PGHFRGVSTIVSKLFNLVQPDIA
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Template Sequence  VFIALGLDESRAKFVLGSEYQLSRDYVLDVLKMARITTLNRARRSMDEVSRRKEDPMVSQMIYPLMQALDIAHL. GVDLA
Template Known Secondary structure  TT

TTT
GGGTTTSS
TTTT
S
SSS

TT.T
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   96...100.........110.........120.........130.........140.........150.........160......... 170....
 
   147..150.........160.........170. ........180.........190 .........200.......
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Query Sequence  CFGEKDFQQLALIRKMVADMGFDIE. IVGVPIMRAKDGLALSSRN. . . GYLTAEQRKIAPGLYKV. . . . . . . . . . . . . . .
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Template Sequence  VGGIDQRKIHMLARENLPRLGYSSPVCLHTPILVGLDGQKMSSSKGNYISVRDPPEEVERKIRKAYCPAGVVEENPILDI
Template Known Secondary structure  GGGGGGGT






B
TTSSB

TTTT
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BTT

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   175....180.........190.........200.........210.........220.........230.........240.........250....
 
   208.210.........220.........230.....
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Query Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . LSSIADKLQAGERDLDEIITIAGQELNE
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Template Sequence  AKYHILPRFGKIVVERDAKFGGDVEYASFEELAEDFKSGQLHPLDLKIAVAKYLNM
Template Known Secondary structure  TS



GGGT

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   255....260.........270.........280.........290.........300.........310
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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