|   |
4 | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | |
. | . | . | . | . | . | . | . | . | 60 | . | |
|
. | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 |
Predicted Secondary structure |   |
 |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|  | . |  |  |  |  |  |  |  |
|
|
|
| . | . |
|
|
|  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
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|
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|
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|
|
|
|
|
|
|
|
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|
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|
|
|
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|
|
| . |
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|
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|
|
| . |
. |
|
|
|
|
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|
|
|
|
|
Query Sequence |   |
I | E | T | L | P | L | L | R | Q | Q | I | R | R | L | R | M | E | G | K | R | V | A | L | V | P | T | M | G | N | L | H | D | G | H | M | K | L | V | D | E | A | K | A | R | A | D | V | . |
V | V | V | S | I | F | V | N | P | M | Q | . |
. |
F | D | R | P | E | D | L | A | R | Y | P | R | T | L | Q | E | D | C | E |
Query Conservation |   |
|   |
|   |   |
|
|
|   |   |   |   |   |   |
|   |   |
|   |   |
|
|
|
|
|
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|   |
|
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|
|   |   |
|   |   |   |   |
|   | . |
|
|
|
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|
|
|
|
|   |
| . | . |
|   |   |   |
|
|   |   |   |
|
|
|   |
|   |   |
|   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
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|
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|
|
|
|
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|
| . |
|
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|
| . |
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|
| . | . |
|
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|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |
|
|
|   |   |   |
|   |   |   |   |   |   |   |
|
|   |
|   |   |
|
| . |
|   |
|
|
|
|   |   |   |   |   |   |   |   |   |   |
|
|   |   |
|   |   |   |   |
|   |
|
|
|   |   |
|   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |
Template Sequence |   |
V | V | T | E | E | E | L | R | Q | L | I | E | T | K | E | K | P | R | A | Y | V | G | Y | E | P | S | . |
G | E | I | H | L | G | H | M | M | T | V | Q | K | L | M | D | L | Q | E | A | G | F | E | I | I | V | L | L | A | D | I | H | A | Y | L | N | E | K | G | T | F | E | E | I | A | E | V | A | D | Y | N | K | K |
Template Known Secondary structure |   |
 |  | T |  |  |  |  |  |  |  |  |  | S |
| S |
|
|  |  |  |  |  |  |
|
|
| . | S |
|
| B |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
|  |  |  |  |  |  |
|  |  |  |  |  |  | T | T |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
 |
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |
|
|
| . |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
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|
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  |   |
17 | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | |
. | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . |
  |
  |   |
81 | . | . | . | . | . | . | . | |
|
|
|
. | 90 | . | . | |
|
|
|
. | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | |
|
|
|
|
|
. | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |
|
|
|
| . | . | . | . |  |  |  |  | . | . | . | . |
|
|  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |
|  |  |  |  |
|
|
|
|
|
|
|
| . | . | . | . | . | . |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
| . |
. |
. |
. |
|
|
|
| . |
. |
. |
. |
|
|
|
|
|
|
|
|
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|
|
|
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|
|
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|
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|
|
|
|
| . |
. |
. |
. |
. |
. |
|
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|
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|
|
|
|
Query Sequence |   |
K | L | N | K | R | K | V | D | . |
. |
. |
. |
L | V | F | A | . |
. |
. |
. |
P | S | V | K | E | I | Y | P | N | G | T | E | T | H | T | Y | V | D | V | P | G | L | S | T | M | L | E | G | A | S | R | . |
. |
. |
. |
. |
. |
P | G | H | F | R | G | V | S | T | I | V | S | K | L | F | N | L | V | Q | P | D | I | A |
Query Conservation |   |
|
|   |   |   |
|
|
| . | . | . | . |   |
|
|   | . | . | . | . |
|   |   |   |
|
|
|
|   |
|   |   |   |   |   |   |
|   |   |   |   |
|   |   |   |
|
|
|   |   |
| . | . | . | . | . | . |
|
|
|
|   |
|
|   |
|
|
|   |
|
|
|
|
|
|   |
|   |   |
|
Alig confidence |   |
|
|
|
|
|
|
|
| . | . | . | . |
|
|
|
| . | . | . | . |
|
|
|
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|
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|
|
|
| . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
Template Conservation |   |
  |   |   |
|   |
|   |
|   |   |
|   |   |
|   |   |
|
|   |   |   |   |   |   |   |
|   |   |   |
|   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |
|   |   |   |
|
|   |
|
|
|
|
|
|
|   |   | . |   |   |   |   |
|
Template Sequence |   |
V | F | I | A | L | G | L | D | E | S | R | A | K | F | V | L | G | S | E | Y | Q | L | S | R | D | Y | V | L | D | V | L | K | M | A | R | I | T | T | L | N | R | A | R | R | S | M | D | E | V | S | R | R | K | E | D | P | M | V | S | Q | M | I | Y | P | L | M | Q | A | L | D | I | A | H | L | . |
G | V | D | L | A |
Template Known Secondary structure |   |
 |  |  |  | T | T |
|
| T | T | T |
|  |  |  |  | G | G | G | T | T | T | S |  |  |  |  |  |  |  |  |  |  |  |  |  | S |
|  |  |  |  |  |  |  | T | T | T | T |
| S |
| S | S | S |
|
| T |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | . | T |
| S |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
| . |
|
|
|  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
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|
|
|
|
|
|
|
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|
|
|
|
|
|
|
  |   |
96 | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | |
170 | . | . | . | . |
  |
  |   |
147 | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | |
. | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | |
|
|
. | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Predicted Secondary structure |   |
 |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  | . |  |  |  |  |
|  |  |  |
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
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|
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|
|
|
|
| . |
. |
. |
|
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|
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|
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|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
Query Sequence |   |
C | F | G | E | K | D | F | Q | Q | L | A | L | I | R | K | M | V | A | D | M | G | F | D | I | E | . |
I | V | G | V | P | I | M | R | A | K | D | G | L | A | L | S | S | R | N | . |
. |
. |
G | Y | L | T | A | E | Q | R | K | I | A | P | G | L | Y | K | V | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
Query Conservation |   |
  |
|
|
|
|
|   |
|
|
|   |
|
|
|   |
|
|   |
|
|   |   |   |
|   | . |
|   |   |   |
|
|
|
|
|   |
|
|
|
|   |
|
|
|
| . | . | . |   |   |
|
|   |   |
|
|   |   |
|   |   |
|   |   |
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
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| . |
|
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|
| . | . | . |
|
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|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
Template Conservation |   |
  |   |
|   |
|
|   |   |   |
|   |   |   |
|
|
|
|   |
|   |   |   |   |   |
|   |   |
|   |   |
|   |
|
|   |
|   |
|   |
|
|
|
|
|   |   |
|   |
|   |
|   |
|   |   |   |   |
|   |   |
|
|   |   |
|   |
|
|   |   |   |   |   |   |
|   |   |   |   |   |
Template Sequence |   |
V | G | G | I | D | Q | R | K | I | H | M | L | A | R | E | N | L | P | R | L | G | Y | S | S | P | V | C | L | H | T | P | I | L | V | G | L | D | G | Q | K | M | S | S | S | K | G | N | Y | I | S | V | R | D | P | P | E | E | V | E | R | K | I | R | K | A | Y | C | P | A | G | V | V | E | E | N | P | I | L | D | I |
Template Known Secondary structure |   |
 |  |  | G | G | G |  |  |  |  |  |  |  |  |  |  | G | G | G | G | T |
|
|
|
|  |  |  |  |  |
|
|
| B |
| T | T | S | S | B |
|
| T | T | T | T |
| S |
| B | T | T |
|
|  |  |  |  |  |  |  |  |  | T | S |
|
|
| T | T |
|
| T | T |
|  |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |
|
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|  |  |  |  |  |  |  |  |  |
|
|
|
|
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|
|
|
|
|
|
|
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
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|
|
|
|
|
|
|
|
|
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|
|
|
  |   |
175 | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . | . | . | . | . | . | . | 250 | . | . | . | . |
  |
  |   |
|
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|
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|
208 | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . |
Predicted Secondary structure |   |
. | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
Query SS confidence |   |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
|
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|
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|
|
|
|
Query Sequence |   |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
L | S | S | I | A | D | K | L | Q | A | G | E | R | D | L | D | E | I | I | T | I | A | G | Q | E | L | N | E |
Query Conservation |   |
. | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|   |   |
|   |   |   |   |   |   |
|   |   |   |   |   |   |
|   |   |   |   |   |   |   |
|   |   |
Alig confidence |   |
. | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
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Template Conservation |   |
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Template Sequence |   |
A | K | Y | H | I | L | P | R | F | G | K | I | V | V | E | R | D | A | K | F | G | G | D | V | E | Y | A | S | F | E | E | L | A | E | D | F | K | S | G | Q | L | H | P | L | D | L | K | I | A | V | A | K | Y | L | N | M |
Template Known Secondary structure |   |
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| G | G | G | T |
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Template Predicted Secondary structure |   |
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Template SS confidence |   |
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  |   |
255 | . | . | . | . | 260 | . | . | . | . | . | . | . | . | . | 270 | . | . | . | . | . | . | . | . | . | 280 | . | . | . | . | . | . | . | . | . | 290 | . | . | . | . | . | . | . | . | . | 300 | . | . | . | . | . | . | . | . | . | 310 |
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