Return to main results Retrieve Phyre Job Id

Job DescriptionP05825
Confidence6.81%DateThu Jan 5 10:58:57 GMT 2012
Rank52Aligned Residues132
% Identity8%Templated2zfga1
SCOP infoTransmembrane beta-barrels Porins Porin
Resolution1.59

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   527..530.........540.........550.........560.........570.........580.........590.........600......
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Query Sequence  ETSINKEIGLEFKRDGWLAGVTWFRNDYRNKIEAGYVAVGQNAVGTDLYQWDNVPKAVVEGLEGSLNVPVSETVMWTNNI
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Template Sequence  KKAEQWATGLKYDANNIYLAANYGETRNATPITNKFTN. . . . . . . . . . . . . TSGFANKTQDVLLVAQYQFDFGLRPSIAY
Template Known Secondary structure  STTS
STTTT.............
S

TTS
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   209210.........220.........230.........240...... ...250.........260.........270.....
 
   607..610.........620.........630.........640.........650.........660.........670.........680......
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Query Sequence  TYMLKSENKTTGDRLSIIPEYTLNSTLSWQAREDLSMQTTFTWYGKQQPKKYNYKGQPAVGPETKEISPYSIVGLSATWD
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Template Sequence  TKSKAKDVEGIGDVDLV. . . NYFEVGATYYFNKNMSTYVDYIIN. . . . . . . . . . . . . QIDSDNKLGVGSDDTVAVGIVYQ
Template Known Secondary structure  TTT...TT.............


TT
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   276...280.........290.. .......300.........310...... ...320.........330.........
 
   687
Predicted Secondary structure 
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Query Sequence  V
Query Conservation   
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Template Conservation 
Template Sequence  F
Template Known Secondary structure 
Template Predicted Secondary structure 
Template SS confidence 
   340
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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