Job Description P05825 Confidence 5.82% Date Thu Jan 5 10:58:57 GMT 2012 Rank 58 Aligned Residues 106 % Identity 6% Template d2vdfa1 SCOP info Transmembrane beta-barrels OMPT-like Outer membrane adhesin/invasin OpcA Resolution 1.95

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		582	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.												.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.							640	.	.	.	.
Predicted Secondary structure																																	.	.	.	.	.	.	.	.	.	.	.																												.	.	.	.	.	.
Query SS confidence																																	.	.	.	.	.	.	.	.	.	.	.																												.	.	.	.	.	.
Query Sequence		K	A	V	V	E	G	L	E	G	S	L	N	V	P	V	S	E	T	V	M	W	T	N	N	I	T	Y	M	L	K	S	.	.	.	.	.	.	.	.	.	.	.	E	N	K	T	T	G	D	R	L	S	I	I	P	E	Y	T	L	N	S	T	L	S	W	Q	A	R	E	.	.	.	.	.	.	D	L	S	M	Q
Query Conservation																																	.	.	.	.	.	.	.	.	.	.	.																												.	.	.	.	.	.
Alig confidence																																	.	.	.	.	.	.	.	.	.	.	.																												.	.	.	.	.	.
Template Conservation
Template Sequence		A	A	K	H	I	G	V	R	A	D	I	P	F	D	A	N	Q	G	I	R	L	E	A	G	F	G	R	S	K	K	N	I	I	N	L	E	T	D	E	N	K	L	G	K	T	K	N	V	K	L	P	T	G	V	P	E	N	R	I	D	L	Y	T	G	Y	T	Y	T	Q	T	L	S	D	S	L	N	F	R	V	G
Template Known Secondary structure														S	S	S	S																										T	S	S									S																				T	T
Template Predicted Secondary structure
Template SS confidence
		32	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.
		645	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	T	F	T	W	Y	G	K	Q	Q	P	K	K	Y	N	Y	K	G	Q	P	A	V	G	P	E	T	K	E	I	S	P	Y	S	I	V	G	L	S	A	T	W	D	V	T	K	N	V	S	L	T	G	G	V	D
Query Conservation
Alig confidence																						.	.	.	.	.	.	.	.	.	.	.
Template Conservation																						.	.	.	.	.	.	.	.	.	.	.
Template Sequence		A	G	L	G	F	E	S	S	K	D	S	I	L	H	S	S	R	Q	S	W	.	.	.	.	.	.	.	.	.	.	.	L	A	K	V	H	A	D	L	L	S	Q	L	G	N	G	W	Y	I	N	P	W	S	E
Template Known Secondary structure																						.	.	.	.	.	.	.	.	.	.	.														T	T
Template Predicted Secondary structure																						.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		112	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.												.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions