Job Description P05825 Confidence 3.05% Date Thu Jan 5 10:58:57 GMT 2012 Rank 96 Aligned Residues 50 % Identity 36% Template d2fmba_ SCOP info Acid proteases Acid proteases Retroviral protease (retropepsin) Resolution 1.80

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		104	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	L	I	L	I	D	G	K	P	V	S	S	R	N	S	V	R	Q	G	W	R	G	E	R	D	T	R	G	D	T	S	W	V	P	P	E	M	I	E	R	I	E	V	L	R	G	P	A	A	A	R	Y	G	N	G	A	A	G	G	V	V
Query Conservation
Alig confidence													.	.	.	.	.	.	.	.	.	.																						.
Template Conservation													.	.	.	.	.	.	.	.	.	.																						.
Template Sequence		T	I	V	L	I	N	D	T	P	L	N	.	.	.	.	.	.	.	.	.	.	V	L	L	D	T	G	A	D	T	S	V	L	T	T	A	H	Y	N	R	L	K	.	Y	R	G	R	K	Y	Q	G	T	G	I	G	G	V	G	G	N	V
Template Known Secondary structure							T	T					.	.	.	.	.	.	.	.	.	.					T	T		S	S												S	.	S													T	T
Template Predicted Secondary structure													.	.	.	.	.	.	.	.	.	.																						.
Template SS confidence
		11	.	.	.	.	.	.	.	.	20	.											.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.		.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions