Job Description P05825 Confidence 64.20% Date Thu Jan 5 10:58:57 GMT 2012 Rank 31 Aligned Residues 136 % Identity 15% Template d1p4ta_ SCOP info Transmembrane beta-barrels OMPA-like Outer membrane protein Resolution 2.55

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		579	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	V	P	K	A	V	V	E	G	L	E	G	S	L	N	V	P	V	S	E	T	V	M	W	T	N	N	I	T	Y	M	L	K	S	E	N	K	T	T	G	D	R	L	S	I	I	P	E	Y	T	L	N	S	T	L	S	W	Q	A	R	E	D	L	S	M	Q	T	T	F	T	W	Y	G	K	Q	Q	P	K	K	Y
Query Conservation
Alig confidence																						.																										.	.	.
Template Conservation																						.																										.	.	.
Template Sequence		S	L	G	S	A	K	G	F	S	P	R	I	S	A	G	Y	R	I	N	D	.	L	R	F	A	V	D	Y	T	R	Y	K	N	Y	K	A	P	S	T	D	F	K	L	Y	S	I	.	.	.	G	A	S	A	I	Y	D	F	D	T	Q	S	P	V	K	P	Y	L	G	A	R	L	S	L	N	R	A	S	V	D	L
Template Known Secondary structure		S	S																	T	T	.													S	S			S	S								.	.	.											S	S	S
Template Predicted Secondary structure																						.																										.	.	.
Template SS confidence
		20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.		40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.				.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.
		659	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	Y	K	G	Q	P	A	V	G	P	E	T	K	E	I	S	P	Y	S	I	V	G	L	S	A	T	W	D	V	T	K	N	V	S	L	T	G	G	V	D	N	L	F	D	K	R	L	W	R	A	G	N	A	Q	T	T	G	D	L	A	G	A	N	Y	I	A	G	A	G	A	Y	T	Y	N	E	P	G	R	T	W
Query Conservation
Alig confidence																.	.	.	.	.	.																				.	.	.	.	.	.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																.	.	.	.	.	.																				.	.	.	.	.	.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		G	G	S	D	S	F	S	Q	T	S	I	G	L	G	.	.	.	.	.	.	V	L	T	G	V	S	Y	A	V	T	P	N	V	D	L	D	A	G	Y	.	.	.	.	.	.	R	Y	N	Y	I	G	K	V	N	T	V	K	N	V	R	S	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	L
Template Known Secondary structure		T	T													.	.	.	.	.	.											T	T								.	.	.	.	.	.									T	T								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																.	.	.	.	.	.																				.	.	.	.	.	.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		96	.	.	.	100	.	.	.	.	.	.	.	.	.							110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.							.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.																	.	.
		739	740	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	M	S	V	N	T	H	F
Query Conservation
Alig confidence
Template Conservation
Template Sequence		S	A	G	V	R	V	K	F
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		148	.	150	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions