Job Description P05825 Confidence 3.00% Date Thu Jan 5 10:58:57 GMT 2012 Rank 100 Aligned Residues 84 % Identity 14% Template d1iwga6 SCOP info Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains Multidrug efflux transporter AcrB TolC docking domain; DN and DC subdomains Resolution 3.50

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		48	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.			.	.	.	.	70	.	.		.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.		.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.
Predicted Secondary structure																				.	.								.																																			.
Query SS confidence																				.	.								.																																			.
Query Sequence		P	G	V	S	T	I	T	A	D	E	I	R	K	N	P	V	A	R	.	.	D	V	S	K	I	I	R	.	T	M	P	G	V	N	L	T	G	N	S	T	S	G	Q	R	G	N	N	R	Q	I	D	I	R	G	M	G	P	E	N	T	L	I	.	L	I	D	G	K	P	V	S	S	R	N	S	V	R	Q	G	W
Query Conservation																				.	.								.																																			.
Alig confidence																				.	.								.								.	.	.																									.															.	.	.
Template Conservation																																					.	.	.																																								.	.	.
Template Sequence		P	Q	F	K	I	D	I	D	Q	E	K	A	Q	A	L	G	V	S	I	N	D	I	N	T	T	L	G	A	A	W	G	G	S	Y	V	.	.	.	N	D	F	I	D	R	G	R	V	K	K	V	Y	V	M	S	E	A	K	Y	R	M	L	P	D	D	I	G	D	W	Y	V	R	A	A	D	G	Q	M	.	.	.
Template Known Secondary structure																	T															T					.	.	.						T	T											G	G	G	S	S	S	G	G	G	G	T	T						T	T	S			.	.	.
Template Predicted Secondary structure																																					.	.	.																																								.	.	.
Template SS confidence
		725	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.				760	.	.	.	.	.	.	.	.	.	770	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.	.	.	.	.	790	.	.	.	.	.	.	.	.
		124	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	G	E	R	D	T	R	G	D	T	S	W	V	P	P	E	M	I	E	R	I	E	V	L	R	G
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	V	P	F	S	A	F	S	S	S	R	W	E	Y	G
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.			G	G	G	T
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
														799	800	.	.	.	.	.	.	.	.	.	810	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions