Job Description P05825 Confidence 3.58% Date Thu Jan 5 10:58:57 GMT 2012 Rank 80 Aligned Residues 147 % Identity 7% Template c3nsgA_ PDB info PDB header:membrane protein Chain: A: PDB Molecule:outer membrane protein f; PDBTitle: crystal structure of ompf, an outer membrane protein from salmonella2 typhi Resolution 2.79 Å

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		515	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	C	Y	L	Q	G	N	D	D	L	K	A	E	T	S	I	N	K	E	I	G	L	E	F	K	R	D	G	W	L	A	G	V	T	W	F	R	N	D	Y	R	N	K	I	E	A	G	Y	V	A	V	G	Q	N	A	V	G	T	D	L	Y	Q	W	D	N	V	P	K	A	V	V	E	G	L	E	G	S	L	N	V
Query Conservation
Alig confidence																																																				.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																				.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		R	T	N	D	Q	Q	D	R	D	G	N	G	D	R	A	E	S	R	A	V	G	A	K	Y	D	A	N	N	V	Y	L	A	A	V	Y	A	E	T	R	N	X	S	I	V	E	N	T	V	T	D	.	.	.	.	.	.	.	.	.	.	.	.	.	T	V	E	X	A	N	K	T	Q	N	L	E	V	V	A	Q	Y
Template Known Secondary structure				S	T	T	S	S	S	S	S			S														T	T											S	S							T	T	T		.	.	.	.	.	.	.	.	.	.	.	.	.						S
Template Predicted Secondary structure																																																				.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		195	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.														.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.
		595	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	V	S	E	T	V	M	W	T	N	N	I	T	Y	M	L	K	S	E	N	K	T	T	G	D	R	L	S	I	I	P	E	Y	T	L	N	S	T	L	S	W	Q	A	R	E	D	L	S	M	Q	T	T	F	T	W	Y	G	K	Q	Q	P	K	K	Y	N	Y	K	G	Q	P	A	V	G	P	E	T	K	E	I	S
Query Conservation
Alig confidence																																.	.																									.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																.	.																									.	.	.	.	.	.	.	.	.	.	.
Template Sequence		Q	F	D	F	G	L	R	P	A	I	S	Y	V	Q	S	K	G	K	Q	L	N	G	A	G	G	S	A	D	L	A	.	.	K	Y	I	Q	A	G	A	T	Y	Y	F	N	K	N	X	N	V	W	V	D	Y	R	F	N	.	.	.	.	.	.	.	.	.	.	.	L	L	D	E	N	D	Y	S	S	S	Y	V	G
Template Known Secondary structure				T	T	S														S		T	T	T	T	S						.	.													S	S											.	.	.	.	.	.	.	.	.	.	.						S	S		T	T	T	T
Template Predicted Secondary structure																																.	.																									.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		262	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.			.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.												.	.	.	.	320	.	.	.	.	.	.	.	.
		675	.	.	.	.	680	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	Y	S	I	V	G	L	S	A	T	W	D	V
Query Conservation
Alig confidence
Template Conservation
Template Sequence		T	D	D	Q	A	A	V	G	I	T	Y	Q	F
Template Known Secondary structure		S	S
Template Predicted Secondary structure
Template SS confidence
		329	330	.	.	.	.	.	.	.	.	.	340	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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