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Job DescriptionP05825
Confidence5.25%DateThu Jan 5 10:58:57 GMT 2012
Rank62Aligned Residues173
% Identity10%Templatec2qomB_
PDB info PDB header:hydrolaseChain: B: PDB Molecule:serine protease espp; PDBTitle: the crystal structure of the e.coli espp autotransporter beta-domain.
Resolution2.66 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   535....540.........550.........560.........570.........580.........590.........600.. .......610..
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Query Sequence  GLEFKRDGWLAGVTWFRNDYRNKIEAGYVAVGQNAVGTDLYQWDNVPKAVVEGLEGSLNVPVSETVMW. . TNNITYMLKS
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Template Sequence  ASAMFDSGAYIDLIGKYVHHDNEYTATFATRDYS. . . . . . . . . . . . THSWYAGAEAGYRYHVTEDAWIEPQAELVYGSVS
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   11091110.........1120.........1130.........1140.. .......1150.........1160.........1170......
 
   613......620..... ....630.........640.........650.........660.........670.... .....680
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Query Sequence  ENKTTGDRLSIIP. . . . . . . . . EYTLNSTLSWQAREDLSMQTTFTWYGKQQPKKYNYKGQPAVGPETKEIS. . . PYSIVG
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Template Conservation       
                    
                                                     
Template Sequence  GKQFAWKDGMHLSMKDKDYNPLIGRTGVDVGKSFSGKWKVTARAGLGYQFDLLANGETVLRDASGEKRIKGEKDSRMLMS
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   1180.........1190.........1200.........1210.........1220.........1230.........1240.........1250.........
 
   681........690.........700.........710.........720.........730.........740......
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Query Sequence  LSATWDVTKNVSLTGGVDNLFDKRLWRAGNAQTTGDLAGANYIAGAGAYTYNEPGRTWYMSVNTHF
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Template Sequence  VGLNAEIRDNVRFGLEFEKSAFGKYNVDN. . . . . . . . . . . . . . . . . . . . . . . . . . . AVNANFRYSF
Template Known Secondary structure  TTT
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   1262.......1270.........1280.........1290 .........1300
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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