 |
Job Description | P76346 | Confidence | 16.38% | Date | Wed Jan 25 15:21:07 GMT 2012 |
Rank | 67 | Aligned Residues | 93 |
% Identity | 22% | Template | c2g62A_ |
PDB info |
PDB header:hydrolase activator | Chain: A: PDB Molecule:protein phosphatase 2a, regulatory subunit b' (pr 53); |
PDBTitle: crystal structure of human ptpa
|
Resolution | 1.60 Å |
|
 |
  |   |
154 | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | |
|
|
|
|
. | . | . | . | . | . | . | 180 | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
. | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . |
Predicted Secondary structure |   |
 |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|  | . | . | . | . | . |  |  |  |  |  |  |  |  | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
L | D | T | R | N | G | D | R | A | S | G | V | P | F | I | P | L | R | E | . |
. |
. |
. |
. |
V | A | G | W | E | H | D | L | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
H | A | A | M | N | N | I | Q | E | E | I | E | L | V | G | E | N | A | A | S | I | D | A | Y | A | A | S | D | P | A | E | C |
Query Conservation |   |
|
|   |   |   |
|   |   |   |   |
|   |
|
|   |   |   |   |   | . | . | . | . | . |   |   |   |
|   |   |   |   | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |   |   |   |
|   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|   |
|
|
|
|
|   |
|
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . |
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |   |
|   |   |   |
|   |
|   |
|
|   |   |   |   |   |
|
|
|
|   |
|
|
|   |
|   |   |
|
|   |   |   |   |   |   |
|
|   |   |   |
|   |   |   |   |   |   |   |   |   |
|
|   |   |
|
|   |   |
|
|
|
|   |   |
|
|
| . |
|
|
|
|
|
|
|   |
|
Template Sequence |   |
L | N | T | L | D | R | W | I | D | E | T | P | P | V | D | Q | P | S | R | F | G | N | K | A | Y | R | T | W | Y | A | K | L | D | E | E | A | E | N | L | V | A | T | V | V | P | T | H | L | A | A | A | V | P | E | V | A | V | Y | L | K | E | S | V | G | N | S | T | R | I | D | . |
Y | G | T | G | H | E | A | A | F |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  | T | S |
|
|
|
|
| S |
| S | S | S |
| T |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T | S |
| G | G | G | G | G | G |  |  |  |  |  |  |  |  |  | T | S | S |
| B | T | T | T | T |  | . |  |
|  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
| . |
|
|
|
|  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
81 | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | |
. | . | . | . | . | . | . | . | . |
  |
  |   |
213 | . | . | . | . | . | . | 220 | . | |
|
|
. | . | . | . | . | . | . | |
|
|
|
|
|
|
. | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  | . | . | . |
|
|  |  |  |  |  | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
| . |
. |
. |
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
F | A | V | L | S | E | Y | F | F | . |
. |
. |
S | A | P | E | L | F | A | . |
. |
. |
. |
. |
. |
. |
P | R | F | P | S | L | W | Q | R | F | C | Q | F | Y | Q | Q | D | P | L |
Query Conservation |   |
|
|
|   |
|
|   |
|
| . | . | . |
|   |
|   |   |
|   | . | . | . | . | . | . | . |   |   |   |
|   |
|
|   |   |
|   |   |   |
|
|
|
|
|   |
Alig confidence |   |
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
| . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |
|
|   |   |
|   |   |
|
|
|
|   |   |   |
|   |   |
|   |
|
|   |
|
|   |
|
|
|   |
|   |
|   |
|
|   |   |
|   |
|
|
|
|
Template Sequence |   |
A | A | F | L | C | C | L | C | K | I | G | V | L | R | V | D | D | Q | I | A | I | V | F | K | V | F | N | R | Y | L | E | V | M | R | K | L | Q | K | T | Y | R | M | E | P | A |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  | T | T | S | S |
| G | G | G |  |  |  |  |  |  | T |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
|  |  |
|
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|