 |
Job Description | P00904 | Confidence | 28.11% | Date | Wed Jan 25 15:20:09 GMT 2012 |
Rank | 401 | Aligned Residues | 72 |
% Identity | 18% | Template | d2i14a1 |
SCOP info | TIM beta/alpha-barrel
| Nicotinate/Quinolinate PRTase C-terminal domain-like
| NadC C-terminal domain-like
|
Resolution | 2.90 |
|
 |
  |   |
4 | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | |
|
|
|
|
|
. | . | . | . | . | . | . | |
|
|
|
|
|
. | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . |
Predicted Secondary structure |   |
 |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|
| . | . | . | . | . | . |  |  |  |  |  |  |
| . | . | . | . | . | . |
|
|
|  |  |  |  |
|
|
|
|
|
|  |  |  |
|
|
|
|  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
I | L | L | L | D | N | I | D | S | F | T | Y | N | L | A | D | Q | L | R | S | N | G | H | N | V | V | I | Y | R | N | H | I | P | A | Q | T | L | . |
. |
. |
. |
. |
. |
I | E | R | L | A | T | M | . |
. |
. |
. |
. |
. |
S | N | P | V | L | M | L | S | P | G | P | G | V | P | S | E | A | G | C | M | P | E | L | L |
Query Conservation |   |
|
|
|
|
|   |   |
|
|
|   |   |   |
|   |   |   |
|   |   |   |
|   |   |
|   |
|   |   |   |
|   |   |   |   |   |   | . | . | . | . | . | . |   |   |   |
|   |   |   | . | . | . | . | . | . |   |   |   |   |
|
|
|
|
|
|
|
|   |   |   |
|   |   |   |   |   |   |
|   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . |
|
|
|
|
|
|
| . | . | . | . | . | . |
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |
|
|
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|
|
|
|
|
|   |   |   |   |
|
|
|   |   |
|   |   |   |   |
|   |   |
|
|   |   |
|   |   |   |
|   |
|
|   |
| . | . | . | . | . | . | . | . |   |
|
|
|   |   |   |
|
Template Sequence |   |
I | A | L | V | D | T | F | Y | D | E | K | V | E | A | V | M | A | A | E | A | L | G | K | K | L | F | A | V | R | L | D | T | P | S | S | R | R | G | N | F | R | K | I | I | E | E | V | R | W | E | L | K | V | R | G | Y | D | W | V | K | I | F | V | S | . |
. |
. |
. |
. |
. |
. |
. |
G | G | L | D | E | E | K | I |
Template Known Secondary structure |   |
 |  |  |
|
| S | S | S |
|  |  |  |  |  |  |  |  |  | T | T | T | G | G | G |
|
|  |  |  |  |
|
|
| T | T | T |
| S |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
|
| S |
|  |  |  |  |  | . | . | . | . | . | . | . | . | S | S |
|
|  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |
| . | . | . | . | . | . | . | . |
|
|
|
|  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
205 | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . | . | . | . | . | . | . | 250 | . | . | . | . | . | . | . | . | . | 260 | . | . | . | . | . | . | . | . | |
|
|
|
|
|
|
|
. | 270 | . | . | . | . | . | . |
  |
  |   |
72 | . | . | . | . | . | . | . | 80 | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |
|
|
|
|  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
T | R | L | R | G | K | L | P | I | I | G | I |
Query Conservation |   |
  |   |   |   |   |   |   |
|
|
|
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |
|   |   |   |
|
|   |
|
|
|
Template Sequence |   |
K | E | I | V | D | V | V | D | A | F | G | V |
Template Known Secondary structure |   |
 | T | T | G | G | G |
| S |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |
|
|  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
277 | . | . | 280 | . | . | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|