Job Description P00904 Confidence 99.92% Date Wed Jan 25 15:20:09 GMT 2012 Rank 47 Aligned Residues 197 % Identity 16% Template d1l9xa_ SCOP info Flavodoxin-like Class I glutamine amidotransferase-like Class I glutamine amidotransferases (GAT) Resolution 1.60

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		8	.	10	.	.	.	.		.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.			.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.
Predicted Secondary structure									.																																		.	.																																.	.	.	.	.	.
Query SS confidence									.																																		.	.																																.	.	.	.	.	.
Query Sequence		D	N	I	D	S	F	T	.	Y	N	L	A	D	Q	L	R	S	N	G	H	N	V	V	I	Y	R	N	H	I	P	A	Q	T	L	I	E	R	L	A	T	M	.	.	S	N	P	V	L	M	L	S	P	G	P	G	V	P	S	E	A	G	C	M	P	E	L	L	T	R	L	R	G	K	L	.	.	.	.	.	.
Query Conservation									.																																		.	.																																.	.	.	.	.	.
Alig confidence									.																		.	.	.	.													.	.																																.	.	.	.	.	.
Template Conservation																											.	.	.	.
Template Sequence		N	Y	G	R	Y	Y	I	A	A	S	Y	V	K	Y	L	E	S	A	G	A	R	V	V	P	V	.	.	.	.	R	L	D	L	T	E	K	D	Y	E	I	L	F	K	S	I	N	G	I	L	F	P	G	G	S	V	D	L	R	R	S	D	Y	A	K	V	A	K	I	F	Y	N	L	S	I	Q	S	F	D	D	G
Template Known Secondary structure		T	T		S														T	T							.	.	.	.		S	S													S	S											T	T	T																				T	T
Template Predicted Secondary structure																											.	.	.	.
Template SS confidence
		26	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50					.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.
					79	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.													.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.																																								.	.	.	.	.	.	.	.	.	.	.	.																					.	.	.	.	.	.
Query SS confidence		.	.	.																																								.	.	.	.	.	.	.	.	.	.	.	.																					.	.	.	.	.	.
Query Sequence		.	.	.	P	I	I	G	I	C	L	G	H	Q	A	I	V	E	A	Y	G	G	Y	V	G	Q	A	G	E	I	L	H	G	K	A	S	S	I	E	H	D	G	Q	.	.	.	.	.	.	.	.	.	.	.	.	A	M	F	A	G	L	T	N	P	L	P	V	A	R	Y	H	S	L	V	G	.	.	.	.	.	.
Query Conservation		.	.	.																																								.	.	.	.	.	.	.	.	.	.	.	.																					.	.	.	.	.	.
Alig confidence		.	.	.																																								.	.	.	.	.	.	.	.	.	.	.	.																					.	.	.	.	.	.
Template Conservation
Template Sequence		D	Y	F	P	V	W	G	T	C	L	G	F	E	E	L	S	L	L	I	S	G	E	C	L	L	T	A	T	D	T	V	D	V	A	M	P	L	N	F	T	G	G	Q	L	H	S	R	M	F	Q	N	F	P	T	E	L	L	L	S	L	A	V	E	P	L	T	A	N	F	H	K	W	S	L	S	V	K	N	F	T
Template Known Secondary structure										T												S	S																			S	T	T	T	T		S	T	T	T	T	S											S												B
Template Predicted Secondary structure
Template SS confidence
		102	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.
				138	.	140	.	.	.	.	.	.	.	.	.	150		.	.				.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.															180	.	.	.	.	.		.	.	.	.	190	.	.	.	.	.	.
Predicted Secondary structure		.	.														.			.	.	.																												.	.	.	.	.	.	.	.	.	.	.	.	.	.							.
Query SS confidence		.	.														.			.	.	.																												.	.	.	.	.	.	.	.	.	.	.	.	.	.							.
Query Sequence		.	.	S	N	I	P	A	G	L	T	I	N	A	H	F	.	N	G	.	.	.	M	V	M	A	V	R	H	D	A	D	R	V	C	G	F	Q	F	H	P	E	S	I	L	T	T	Q	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	R	L	L	E	Q	.	T	L	A	W	A	Q	Q	K	L	E	P
Query Conservation		.	.														.			.	.	.																												.	.	.	.	.	.	.	.	.	.	.	.	.	.							.
Alig confidence		.	.														.			.	.	.																												.	.	.	.	.	.	.	.	.	.	.	.	.	.							.
Template Conservation
Template Sequence		M	N	E	K	L	K	K	F	F	N	V	L	T	T	N	T	D	G	K	I	E	F	I	S	T	M	E	G	Y	K	Y	P	V	Y	G	V	Q	W	H	P	E	K	A	P	Y	E	W	K	N	L	D	G	I	S	H	A	P	N	A	V	K	T	A	F	Y	L	A	E	F	F	V	N	E	A	R	K	N	N	H	H
Template Known Secondary structure		T																S	S	S										S	S	S						S	S		T	T							S	S		T	T																							T	T	S
Template Predicted Secondary structure
Template SS confidence
		182	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.
		197	.	.	200	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	N	T	L	Q	P	I	L	E	K	L	Y
Query Conservation
Alig confidence
Template Conservation
Template Sequence		F	K	S	E	S	E	E	E	K	A	L	I
Template Known Secondary structure			S	S								S	G
Template Predicted Secondary structure
Template SS confidence
		262	.	.	.	.	.	.	.	270	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions