Return to main results Retrieve Phyre Job Id

Job DescriptionP00904
Confidence24.48%DateWed Jan 25 15:20:09 GMT 2012
Rank427Aligned Residues69
% Identity9%Templated1jx6a_
SCOP infoPeriplasmic binding protein-like I Periplasmic binding protein-like I L-arabinose binding protein-like
Resolution1.50

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   8.10.........20.........30.........40 .........50.........60.........70.........80
Predicted Secondary structure 















.......

















Query SS confidence 
































. . . . . . .







































Query Sequence  DNIDSFTYNLADQLRSNGHNVVIYRNHIPAQTL. . . . . . . IERLATMSNPVLMLSPGPGVPSEAGCMPELLTRLRGKLPI
Query Conservation 
  


   
   
   
  
 
   
      .......   
       







   
      
        

Alig confidence 
































.......





















.....












Template Conservation   
   
  

     
 
    
         
   
   
  
    





        .....             
Template Sequence  DYWVRNIASFEKRLYKLNINYQLNQVFTRPNADIKQQSLSLMEALKSKSDYLIFTLDTTRHR. . . . . KFVEHVLDSTNTK
Template Known Secondary structure 
TT



TT

TT
S

SSSTT.....
S
Template Predicted Secondary structure 




















.....


Template SS confidence 















































































   80.........90.........100.........110.........120.........130.........140. ........150....
 
   81
Predicted Secondary structure 
Query SS confidence 
Query Sequence  I
Query Conservation 
Alig confidence 
Template Conservation 
Template Sequence  L
Template Known Secondary structure 
Template Predicted Secondary structure 
Template SS confidence 
   155
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions