Job Description P00904 Confidence 97.19% Date Wed Jan 25 15:20:09 GMT 2012 Rank 68 Aligned Residues 88 % Identity 23% Template c3uk7B_ PDB info PDB header:transferase Chain: B: PDB Molecule:class i glutamine amidotransferase-like domain-containing PDBTitle: crystal structure of arabidopsis thaliana dj-1d Resolution 2.05 Å

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		4	.	.	.	.	.	10	.	.	.		.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.																												.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.
Predicted Secondary structure												.																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence												.																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		I	L	L	L	D	N	I	D	S	F	.	T	Y	N	L	A	D	Q	L	R	S	N	G	H	N	V	V	I	Y	R	N	H	I	P	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Q	T	L	I	E	R	L	A	T	M	S	N	P	V	L	M	L	S
Query Conservation												.																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence												.																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		F	L	C	G	D	Y	X	E	D	Y	E	V	K	V	P	F	Q	S	L	Q	A	L	G	C	Q	V	D	A	V	C	P	E	K	K	A	G	D	R	C	P	T	A	I	H	D	F	E	G	D	Q	T	Y	S	E	K	P	G	H	T	F	A	L	T	T	N	F	D	D	L	V	S	S	S	Y	D	A	L	V	I	P
Template Known Secondary structure						T	T																	T								T	T			T	T												S	S	S	S													S		T	T	T			G	G	G		S
Template Predicted Secondary structure
Template SS confidence
		202	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.
		56	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.					.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.
Predicted Secondary structure																					.	.	.	.
Query SS confidence																					.	.	.	.
Query Sequence		P	G	P	G	V	P	S	E	A	G	C	M	P	E	L	L	T	R	L	.	.	.	.	R	G	K	L	P	I	I	G	I	C	L	G	H	Q	A	I	V	E	A
Query Conservation																					.	.	.	.
Alig confidence					.																.	.	.	.											.
Template Conservation					.																														.
Template Sequence		G	G	R	.	A	P	E	Y	L	A	L	N	E	H	V	L	N	I	V	K	E	F	X	N	S	E	K	P	V	A	S	I	H	.	G	Q	Q	I	L	A	A	A
Template Known Secondary structure			B	S	.						T	T														T	T								.	T							T
Template Predicted Secondary structure					.																														.
Template SS confidence
		282	.	.		.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.		.	.	.	.	.	.	320	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions