 |
Job Description | P00904 | Confidence | 59.80% | Date | Wed Jan 25 15:20:09 GMT 2012 |
Rank | 277 | Aligned Residues | 79 |
% Identity | 16% | Template | c3snkA_ |
PDB info |
PDB header:signaling protein | Chain: A: PDB Molecule:response regulator chey-like protein; |
PDBTitle: crystal structure of a response regulator chey-like protein (mll6475)2 from mesorhizobium loti at 2.02 a resolution
|
Resolution | 2.02 Å |
|
 |
  |   |
2 | . | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . |
Predicted Secondary structure |   |
|  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|  |  |  |  |
|
|
|
|
|
|  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
A | D | I | L | L | L | D | N | I | D | S | F | T | Y | N | L | A | D | Q | L | R | S | N | G | H | N | V | V | I | Y | R | N | H | I | P | A | Q | T | L | I | E | R | L | A | T | M | S | N | P | V | L | M | L | S | P | G | P | G | V | P | S | E | A | G | C | M | P | E | L | L | T | R | L | R | G | K | L | P | I | I |
Query Conservation |   |
  |   |
|
|
|
|
|   |   |
|
|
|   |   |   |
|   |   |   |
|   |   |   |
|   |   |
|   |
|   |   |   |
|   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |
|
|
|
|
|
|
|
|   |   |   |
|   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |
|
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |
|
|
|
|
|
|
|
|   |   |   |   |   |   |
|   |   |   |
|   |   |   |   |   | . | . |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|
|
|   |
|   |   |
|   |   |   | . |   |
|   |   |   |   |   |   |
|   |   |   |   |   |   |   |
|
|
|
Template Sequence |   |
K | Q | V | A | L | F | S | S | D | P | N | F | K | R | D | V | A | T | R | L | D | A | L | A | I | . |
. |
Y | D | V | R | V | S | E | T | D | D | F | L | K | G | P | P | A | D | T | R | P | G | I | V | I | L | D | L | G | G | G | D | L | . |
L | G | K | P | G | I | V | E | A | R | A | L | W | A | T | V | P | L | I |
Template Known Secondary structure |   |
 |  |  |  |  |  |
| S |
|  |  |  |  |  |  |  |  |  |  |  |  |  | T | S | S | . | . |  |  |  |  |  |  |
| G | G | G | G | G | G |
|
|
| T | T |
|
|
| S |  |  |  |  |  |  |  | T | T | G | G | . | G | G | S | T | T |  |  |  |  |  | G | G | G | T | T |
|
|  |  |
Template Predicted Secondary structure |   |
|  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . | . |
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
14 | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | |
|
. | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | |
. | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 |
  |
  |   |
82 | . |
Predicted Secondary structure |   |
 |  |
Query SS confidence |   |
|
|
Query Sequence |   |
G | I |
Query Conservation |   |
|
|
Alig confidence |   |
|
|
Template Conservation |   |
  |
|
Template Sequence |   |
A | V |
Template Known Secondary structure |   |
 |  |
Template Predicted Secondary structure |   |
|
|
Template SS confidence |   |
|
|
  |   |
91 | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|