 |
Job Description | P00904 | Confidence | 58.82% | Date | Wed Jan 25 15:20:09 GMT 2012 |
Rank | 281 | Aligned Residues | 74 |
% Identity | 14% | Template | c3n6rK_ |
PDB info |
PDB header:ligase | Chain: K: PDB Molecule:propionyl-coa carboxylase, alpha subunit; |
PDBTitle: crystal structure of the holoenzyme of propionyl-coa carboxylase (pcc)
|
Resolution | 3.20 Å |
|
 |
  |   |
1 | . | . | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
|
|  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|  |  |  |  |
|
|
|
|
|
|  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
M | A | D | I | L | L | L | D | N | I | D | S | F | T | Y | N | L | A | D | Q | L | R | S | N | G | H | N | V | V | I | Y | R | N | H | I | P | A | Q | T | L | I | E | R | L | A | T | M | S | N | P | V | L | M | L | S | P | G | P | G | V | P | S | E | A | G | C | M | P | E | L | L | T | R | L | R | G | K | L | P |
Query Conservation |   |
|   |   |
|
|
|
|
|   |   |
|
|
|   |   |   |
|   |   |   |
|   |   |   |
|   |   |
|   |
|   |   |   |
|   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |
|
|
|
|
|
|
|
|   |   |   |
|   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |
|
|
|
|
|
|   |
|   |
| . |
|   |   |   |
|
|
|
|   |   |   |
|
|   |
|
|
|
|   |   |
|   |
|   |   |
|   |   |   |   |   | . | . | . | . |
|
|   |   |   |   |
|   |   |   |   |   |   |   |   |
|   |   |   |   |   |
|   |   |   |
|   |   |   |   |   |
Template Sequence |   |
F | N | K | I | L | I | A | N | R | G | E | I | . |
A | C | R | V | I | K | T | A | R | K | M | G | I | S | T | V | A | I | Y | S | D | A | D | K | Q | A | L | H | V | Q | M | . |
. |
. |
. |
A | D | E | A | V | H | I | G | P | P | P | A | N | Q | S | Y | I | V | I | D | K | V | M | A | A | I | R | A | T | G | A |
Template Known Secondary structure |   |
|
|
| B |
| B | S |
|
|  |  |  | . |  |  |  |  |  |  |  |  | G | G | G | S |
|
| B |
|
|  |  |
| S | T | T | S | S |
|  |  |  |  |  | . | . | . | . | S | S |
|
|  |  |
| S | S | S | S | G | G | G | T | T | S |
|  |  |  |  |  |  |  |  |  |  | T |
|
|
Template Predicted Secondary structure |   |
|
|  |  |  |  |  |
|
|
|  |  | . |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  | . | . | . | . |
|
|  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
63 | . | . | . | . | . | . | 70 | . | . | . | . | |
. | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | |
|
|
|
. | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|